Homer de novo Motif Results (hs_MammaryGland_MCF7_Cancer_FOXK2_SRX1896565_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 735
Total background sequences = 48370
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A T G C A G C T G A C T C T A G A G C T C A G T A C G T T G C A G A T C G T C A 1e-45-1.055e+0215.65%3.03%23.2bp (29.4bp)FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer(0.952)
More Information | Similar Motifs Found		motif file (matrix)
2 C G T A G T C A C T G A C T G A A C T G C G T A G T A C C G A T A G C T G T A C G A C T A G C T A C T G T C A G A G T C G C T A 1e-16-3.788e+010.95%0.00%16.6bp (13.2bp)NFIX/MA0671.1/Jaspar(0.615)
More Information | Similar Motifs Found		motif file (matrix)
3 A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A 1e-16-3.775e+0113.06%5.04%25.6bp (26.6bp)CTCF/MA0139.1/Jaspar(0.680)
More Information | Similar Motifs Found		motif file (matrix)
4 A C G T A C T G A C G T T A G C C G T A C G A T A C G T C G A T C G T A A G T C A G C T A G T C G T C A C G T A A T G C C G T A 1e-14-3.311e+011.09%0.01%28.1bp (26.9bp)IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer(0.575)
More Information | Similar Motifs Found		motif file (matrix)
5 A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C 1e-13-3.209e+011.50%0.04%17.4bp (29.8bp)NFIL3/MA0025.1/Jaspar(0.666)
More Information | Similar Motifs Found		motif file (matrix)
6 A G T C C G T A A C G T A G T C A C G T A C T G C G T A A G T C C G T A A T C G A G T C A G T C C G T A 1e-13-3.174e+010.82%0.00%25.1bp (33.4bp)Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer(0.679)
More Information | Similar Motifs Found		motif file (matrix)
7 G T C A A G T C A C G T A T C G G T C A A C T G C G T A A C T G C G A T A C T G A C T G A T C G C T G A C G T A C T G A C T A G 1e-13-3.174e+010.82%0.00%26.7bp (5.5bp)PB0114.1_Egr1_2/Jaspar(0.628)
More Information | Similar Motifs Found		motif file (matrix)
8 A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G 1e-13-3.174e+010.82%0.00%23.9bp (10.1bp)TBX1/MA0805.1/Jaspar(0.582)
More Information | Similar Motifs Found		motif file (matrix)
9 C T A G T G A C C A T G A C G T A G T C C G T A T A G C A C T G C A G T A T C G 1e-13-3.116e+014.22%0.74%26.1bp (29.0bp)Arntl/MA0603.1/Jaspar(0.899)
More Information | Similar Motifs Found		motif file (matrix)
10 A C G T T C G A C T G A C G T A C G T A C G A T A T G C C G T A A G T C A C G T A C T G A T G C A G T C 1e-13-3.096e+011.50%0.04%26.7bp (27.5bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.803)
More Information | Similar Motifs Found		motif file (matrix)
11 A G T C A T G C A T G C A T C G A C T G A T G C C G T A A C T G A T G C G T A C C G T A G T A C A G T C A C T G A T G C A T C G 1e-12-2.867e+011.09%0.02%26.7bp (23.1bp)ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer(0.554)
More Information | Similar Motifs Found		motif file (matrix)
12 G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T 1e-12-2.866e+012.18%0.17%26.9bp (26.2bp)Sp1(Zf)/Promoter/Homer(0.912)
More Information | Similar Motifs Found		motif file (matrix)
13 C G T A G T A C G T A C G C T A G T A C A C T G T G A C A G T C A C T G T C A G 1e-12-2.839e+013.27%0.48%31.6bp (31.6bp)POL006.1_BREu/Jaspar(0.687)
More Information | Similar Motifs Found		motif file (matrix)
14 C T G A C T G A G T C A C G A T A C G T A G T C A C G T A T C G A C G T A T C G C G T A A C T G G C A T A G T C C T G A C T G A 1e-12-2.822e+010.95%0.01%9.9bp (27.3bp)FOS::JUN/MA0099.2/Jaspar(0.586)
More Information | Similar Motifs Found		motif file (matrix)
15 T A G C A C G T A T G C C T A G A G T C A C G T A C G T A G T C A T G C G C A T A T C G A C G T C T G A C A T G A C T G T C A G 1e-12-2.813e+013.27%0.48%27.6bp (25.0bp)ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer(0.719)
More Information | Similar Motifs Found		motif file (matrix)
16 A T G C A T C G A G T C A G T C A T G C C G T A A T C G G T A C T A G C A G T C A T G C A C T G G T A C A C T G T A G C A T C G 1e-12-2.776e+011.50%0.06%29.6bp (28.5bp)PB0199.1_Zfp161_2/Jaspar(0.617)
More Information | Similar Motifs Found		motif file (matrix)
17 * G A T C G T A C C T A G A T C G C G T A C G T A C T A G C G A T C T G A T C A G 1e-11-2.715e+014.08%0.81%25.0bp (29.1bp)ELK3/MA0759.1/Jaspar(0.912)
More Information | Similar Motifs Found		motif file (matrix)
18 * C T G A T A G C G A T C T G C A G T C A G T A C A G T C C G T A T A C G A G T C C G T A A C T G A C T G T C A G A T G C T G A C 1e-11-2.696e+012.45%0.26%22.0bp (24.7bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.736)
More Information | Similar Motifs Found		motif file (matrix)
19 * C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T 1e-11-2.586e+011.09%0.02%31.4bp (24.8bp)Nr2e1/MA0676.1/Jaspar(0.564)
More Information | Similar Motifs Found		motif file (matrix)
20 * T A C G T C G A C T G A A C T G C T A G C G T A C T G A C T A G T A C G T A G C C G A T A C T G C A T G G A C T C A G T A T G C 1e-10-2.481e+011.36%0.06%25.5bp (21.2bp)EWSR1-FLI1/MA0149.1/Jaspar(0.617)
More Information | Similar Motifs Found		motif file (matrix)
21 * G A C T A T G C C G T A C T G A T A C G C G T A C T G A T A C G C T G A T C G A C G T A C T G A A C T G T C A G C T G A T G A C 1e-10-2.437e+011.90%0.16%21.8bp (24.0bp)NFAT5/MA0606.1/Jaspar(0.592)
More Information | Similar Motifs Found		motif file (matrix)
22 * C G T A C G T A C G T A G A C T T A C G G C T A A C G T A C T G C G T A G T A C G T C A A C G T G T A C 1e-10-2.434e+010.95%0.02%23.8bp (20.5bp)Atf3/MA0605.1/Jaspar(0.669)
More Information | Similar Motifs Found		motif file (matrix)
23 * A C G T A G T C C G T A A C T G A T C G C G A T A G T C G T C A A T C G C G T A A C T G A C G T A T G C 1e-10-2.346e+010.82%0.01%23.1bp (22.5bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.605)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C T G T C A G G T A C A C G T A G C T A G T C A G T C T A C G A C G T T C A G G T A C A C G T A G T C 1e-10-2.305e+012.31%0.29%24.6bp (29.6bp)ELF1/MA0473.2/Jaspar(0.607)
More Information | Similar Motifs Found		motif file (matrix)
25 * A C G T A T G C A G C T C G T A A C T G A G T C A G T C A C G T C G T A C G T A G T C A A C G T A C G T 1e-9-2.230e+010.68%0.01%26.7bp (19.0bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.597)
More Information | Similar Motifs Found		motif file (matrix)
26 * A C T G C G T A A C G T A G T C A C G T C G A T G T A C C G T A A G T C A T C G C G T A C G A T A C T G 1e-9-2.230e+010.68%0.00%19.8bp (12.4bp)PB0109.1_Bbx_2/Jaspar(0.551)
More Information | Similar Motifs Found		motif file (matrix)
27 * C T A G G T C A A T G C C T G A A C T G A C G T A C G T A T G C C G A T A C T G A C T G A T C G A G T C 1e-9-2.230e+010.68%0.00%15.3bp (13.3bp)Myb/MA0100.2/Jaspar(0.617)
More Information | Similar Motifs Found		motif file (matrix)
28 * A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T 1e-9-2.166e+011.63%0.13%29.6bp (26.1bp)Esrra/MA0592.2/Jaspar(0.623)
More Information | Similar Motifs Found		motif file (matrix)
29 * A C G T A C T G C T A G A C T G C G T A C G T A C G T A A T G C C G T A C T A G C G T A A C T G C T A G 1e-9-2.105e+010.82%0.01%25.6bp (21.6bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.705)
More Information | Similar Motifs Found		motif file (matrix)
30 * A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A 1e-8-2.028e+010.68%0.01%23.7bp (22.9bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.654)
More Information | Similar Motifs Found		motif file (matrix)
31 * A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T 1e-8-2.028e+010.68%0.01%30.0bp (18.8bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.657)
More Information | Similar Motifs Found		motif file (matrix)
32 * T G A C A G C T T A G C C G A T A C T G C T A G A C T G A T C G C T G A T A C G A T G C T C G A C T A G C G T A C G T A A C G T 1e-8-2.028e+010.68%0.01%28.2bp (29.2bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.609)
More Information | Similar Motifs Found		motif file (matrix)
33 * T A G C C A T G G C A T C A G T A C G T T G A C G C A T T G C A C A T G C A T G 1e-8-2.013e+011.50%0.12%28.0bp (34.9bp)PB0056.1_Rfxdc2_1/Jaspar(0.770)
More Information | Similar Motifs Found		motif file (matrix)
34 * C G T A A C T G A C T G A C T G A G T C C T A G A G T C A G T C A G T C A C G T A T G C G T A C A G T C 1e-8-1.995e+010.54%0.00%38.8bp (0.0bp)PB0052.1_Plagl1_1/Jaspar(0.757)
More Information | Similar Motifs Found		motif file (matrix)
35 * G A C T A G T C A G T C A G T C C G T A A C T G A G T C C T A G A C T G A G T C G T C A A G T C A T C G 1e-8-1.995e+010.54%0.00%24.4bp (27.2bp)ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer(0.643)
More Information | Similar Motifs Found		motif file (matrix)
36 * A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C 1e-8-1.995e+011.50%0.12%30.0bp (30.6bp)POL004.1_CCAAT-box/Jaspar(0.625)
More Information | Similar Motifs Found		motif file (matrix)
37 * T A C G C T G A C T A G T A C G G T C A A C G T A G T C A G C T C T A G C T A G T A C G A C G T A G T C C G A T A C T G A C G T 1e-8-1.940e+014.49%1.34%23.1bp (24.9bp)ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer(0.624)
More Information | Similar Motifs Found		motif file (matrix)
38 * A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T 1e-8-1.889e+012.45%0.43%20.9bp (27.4bp)PB0062.1_Sox12_1/Jaspar(0.664)
More Information | Similar Motifs Found		motif file (matrix)
39 * T A C G A C T G A C T G C G T A A C G T A T C G A G C T A C G T A C T G A G T C C G A T A C T G A C G T 1e-7-1.719e+010.54%0.00%24.0bp (5.6bp)PB0122.1_Foxk1_2/Jaspar(0.611)
More Information | Similar Motifs Found		motif file (matrix)
40 * A G C T A C T G A C G T A C G T C G T A A G T C A C G T A G T C C G T A A C T G A C T G A C T G A C G T 1e-7-1.719e+010.54%0.01%28.5bp (28.4bp)FOSL1/MA0477.1/Jaspar(0.648)
More Information | Similar Motifs Found		motif file (matrix)
41 * C T A G G T C A C T G A A G T C A G T C T A G C A G C T A C T G A G C T A C G T T C G A C T A G C T A G 1e-7-1.689e+011.22%0.09%26.9bp (27.7bp)Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer(0.667)
More Information | Similar Motifs Found		motif file (matrix)
42 * A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A 1e-7-1.622e+010.95%0.05%20.9bp (24.3bp)MEIS3/MA0775.1/Jaspar(0.762)
More Information | Similar Motifs Found		motif file (matrix)
43 * A C G T A G T C A G T C A G T C A C T G A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A 1e-6-1.437e+010.41%0.00%18.4bp (0.0bp)E2F6/MA0471.1/Jaspar(0.715)
More Information | Similar Motifs Found		motif file (matrix)
44 * A G T C A C G T A C T G C G T A A C T G C T A G A C G T A G T C A G T C A G T C G T C A A C T G A C T G A G T C C G A T A G C T 1e-6-1.437e+010.41%0.00%20.7bp (0.0bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.585)
More Information | Similar Motifs Found		motif file (matrix)
45 * A G T C C G T A A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G A G T C A G T C A C G T A G T C A C T G A C G T 1e-6-1.437e+010.41%0.00%4.5bp (28.8bp)EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer(0.599)
More Information | Similar Motifs Found		motif file (matrix)
46 * A G T C C G T A A G T C A C G T A C G T A C G T A G T C A G T C A C G T A T C G A G T C G T A C A G C T A T C G A C G T A C G T 1e-6-1.437e+010.41%0.00%7.8bp (0.0bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.598)
More Information | Similar Motifs Found		motif file (matrix)
47 * T A G C C T A G G T A C A T C G A G T C T G C A A G C T A C T G A G T C C T A G 1e-6-1.415e+014.22%1.53%28.4bp (33.1bp)NRF1/MA0506.1/Jaspar(0.881)
More Information | Similar Motifs Found		motif file (matrix)
48 * A T C G A C T G A C G T C G T A G T C A G A C T A C T G G T A C A C T G C T G A 1e-4-1.039e+010.82%0.08%16.3bp (30.7bp)Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer(0.657)
More Information | Similar Motifs Found		motif file (matrix)
49 * A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T 1e-4-1.025e+010.41%0.01%26.1bp (26.9bp)POL009.1_DCE_S_II/Jaspar(0.637)
More Information | Similar Motifs Found		motif file (matrix)
50 * A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T 1e-3-8.011e+000.54%0.04%28.7bp (22.4bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.774)
More Information | Similar Motifs Found		motif file (matrix)
51 * C G T A A G T C C G T A A G T C A C T G C G T A A G T C A G T C A G T C A C G T 1e-1-3.112e+000.14%0.01%33.5bp (28.7bp)LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer(0.727)
More Information | Similar Motifs Found		motif file (matrix)