Information for 5-HAGCCCCGCCCCT (Motif 12)

G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T
Reverse Opposite:
C T G A A C T G A C T G A C T G A C T G A G T C C T A G A C T G C A T G A T C G A G T C G C A T C G A T
p-value:1e-12
log p-value:-2.866e+01
Information Content per bp:1.800
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif81.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets58.9 +/- 26.9bp
Average Position of motif in Background47.6 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.91
Offset:1
Orientation:forward strand
Alignment:HAGCCCCGCCCCT
-GGCCCCGCCCCC
 G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:HAGCCCCGCCCCT-
NAGCCCCGCCCCCN
 G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.87
Offset:2
Orientation:forward strand
Alignment:HAGCCCCGCCCCT
--GCCCCGCCCCC
 G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T
A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.85
Offset:2
Orientation:forward strand
Alignment:HAGCCCCGCCCCT----
--GCCCCGCCCCCTCCC
 G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-HAGCCCCGCCCCT--
TCGACCCCGCCCCTAT
 A C G T G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.84
Offset:1
Orientation:forward strand
Alignment:HAGCCCCGCCCCT----
-ATCCCCGCCCCTAAAA
 G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T A C G T A C G T A C G T A C G T
A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.83
Offset:2
Orientation:forward strand
Alignment:HAGCCCCGCCCCT
--GCCCCGCCCC-
 G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T
A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T

SP4/MA0685.1/Jaspar

Match Rank:8
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-HAGCCCCGCCCCT---
TAAGCCACGCCCCCTTT
 A C G T G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.82
Offset:0
Orientation:forward strand
Alignment:HAGCCCCGCCCCT--
NRGCCCCRCCCHBNN
 G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:HAGCCCCGCCCCT
-GGCCACRCCCMK
 G C T A C G T A C T A G A T G C G A T C G T A C A G T C A C T G A G T C A G T C A G T C A G T C G A C T
A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G