Information for 18-TAATAARAATTRT (Motif 38)

A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T
Reverse Opposite:
C G T A G A T C C G T A C G T A A G C T A C G T G A T C C A G T A G C T C G T A C G A T C G A T G T C A
p-value:1e-8
log p-value:-1.889e+01
Information Content per bp:1.737
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif207.7
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets42.0 +/- 20.9bp
Average Position of motif in Background49.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TAATAARAATTRT
NTTNAGAACAATTA-
 A C G T A C G T A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAATAARAATTRT-
NNTNANAACAATTNNA
 A C G T A C G T A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TAATAARAATTRT------
-----AAAATTGTTATGAA
 A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TAATAARAATTRT------
--GGAAAAATTGTTAGGAA
 A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TAATAARAATTRT--
NNNTAACAATTATAN
 A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TAATAARAATTRT
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PB0064.1_Sox14_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAATAARAATTRT-
NNTAATTATAATTNNN
 A C G T A C G T A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0186.1_Tcf3_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TAATAARAATTRT
AGCCGAAAAAAAAAT--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TAATAARAATTRT
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0069.1_Sox21_1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAATAARAATTRT-
TTTAATTATAATTAAG
 A C G T A C G T A C G T C G T A C G T A G C A T C T G A G C T A C T A G C G T A C T G A C G A T A C G T C T A G C G A T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G