Information for 2-GGTGATTATGTAC (Motif 5)

A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C
Reverse Opposite:
A T C G G C A T T G C A G T A C C G T A A C G T G T C A C G T A A C G T A T G C G C T A G T A C A G T C
p-value:1e-13
log p-value:-3.209e+01
Information Content per bp:1.741
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets41.5 +/- 17.4bp
Average Position of motif in Background44.7 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIL3/MA0025.1/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GGTGATTATGTAC---
-----TTATGTAACAT
 A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGTGATTATGTAC-
----RTTATGYAAB
 A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C A C G T
A C G T A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGTGATTATGTAC
NNCTNAATTATGANN
 A C G T A C G T A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGTGATTATGTAC
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGTGATTATGTAC-
AGGGGGATTAGCTGCC
 A C G T A C G T A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

TEF/MA0843.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGTGATTATGTAC--
---NGTTACGTAATN
 A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGTGATTATGTAC
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T A C G T A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

HLF/MA0043.2/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGTGATTATGTAC--
---NGTTACGTAANN
 A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C A C G T A C G T
A C G T A C G T A C G T C A T G T C A G G C A T C A G T C T G A A G T C T C A G G A C T T G C A C G T A A G C T C T A G

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGTGATTATGTAC
GNGGATTAGN---
 A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGTGATTATGTAC
--TGTTTATTT--
 A C T G A C T G C G A T A T C G C G T A A C G T A C G T C G T A C G A T A C T G A C G T C G T A T A G C
A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T