Information for 10-CCGACCAGTC (Motif 36)

A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C
Reverse Opposite:
C T A G C G T A A T G C C G A T A C T G A C T G G C A T A T G C A C T G A C T G
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.854
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif57.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets51.1 +/- 30.0bp
Average Position of motif in Background50.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCGACCAGTC-
ACTAGCCAATCA
 A C G T A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGACCAGTC--
AAATGGACCAATCAG
 A C G T A C G T A C G T A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGACCAGTC--
GCGACCACACTG
 A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCGACCAGTC--------
TGGACCAATCAGCACTCT
 A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCGACCAGTC--
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGACCAGTC-
YCCGCCCACGCN
 A C G T A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGACCAGTC
GCTCCGCCCMCY-
 A C G T A C G T A C G T A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCGACCAGTC--
--AGCCAATCGG
 A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C A C G T A C G T
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGACCAGTC-----
AAAGACCTGTCAATCC
 A C G T A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCGACCAGTC---
TCCGCCCCCGCATT
 A C G T A G T C A G T C T A C G C G T A A G T C A G T C C G T A T A C G A C G T A G T C A C G T A C G T A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T