Information for 19-CCCTGACCTTACTAGT (Motif 31)

A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T
Reverse Opposite:
C G T A G T A C A G C T C T G A A T C G A G C T T C G A C G T A A C T G A C T G A C G T A G T C C G T A C T A G A C T G C T A G
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.766
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.7 +/- 30.0bp
Average Position of motif in Background45.9 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCCTGACCTTACTAGT
---TGACCTYA-----
 A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGACCTTACTAGT
TGACCTTGACCT-------
 A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGACCTTACTAGT
TGACCTTGACCT-------
 A C G T A C G T A C G T A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCCTGACCTTACTAGT
--GTGACCTT------
 A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCCTGACCTTACTAGT
-BNTGDCCTTG-----
 A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCCTGACCTTACTAGT
--CTGACCTTTG----
 A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCTGACCTTACTAGT
--NTGACCTTGA----
 A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCCTGACCTTACTAGT
---TGACCT-------
 A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCCTGACCTTACTAGT
---TGACCTTGAT---
 A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGACCTTACTAGT
CNNTTGACCTTTG----
 A C G T A G T C G T A C A G T C A C G T A C T G T C G A A G T C G T A C A C G T A C G T T C G A A T G C G A C T T C G A A C T G A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T A C G T