Information for 11-TTTCTTGACA (Motif 42)

A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C C G T A C G T A A C T G C G T A C G T A C G T A
p-value:1e-7
log p-value:-1.622e+01
Information Content per bp:1.922
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.4 +/- 20.9bp
Average Position of motif in Background40.6 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.76
Offset:4
Orientation:forward strand
Alignment:TTTCTTGACA--
----TTGACAGG
 A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.75
Offset:4
Orientation:forward strand
Alignment:TTTCTTGACA-
----TTGACAG
 A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.74
Offset:4
Orientation:forward strand
Alignment:TTTCTTGACA--
----TTGACAGC
 A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TTTCTTGACA--
----YTGWCADY
 A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TTTCTTGACA
--ARNTGACA
 A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTTCTTGACA-------
-GTATTGACAGGTNNTT
 A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTCTTGACA
TGTCTAGACG
 A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TTTCTTGACA-
---CTTGGCAA
 A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTTCTTGACA---
---VBTGWCAGCB
 A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTCTTGACA-------
-NTATTGACAGGTNNTN
 A C G T G C A T C G A T A G T C A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T