Information for 15-TGCTGTCCGT (Motif 49)

A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A
p-value:1e-4
log p-value:-1.025e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 26.1bp
Average Position of motif in Background54.7 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGCTGTCCGT
-GCTGTG---
 A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGCTGTCCGT
AATTTGCTGAC---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGTCCGT---
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCTGTCCGT
-GCTGTCAA-
 A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCTGTCCGT---
-NCTGTCAATCAN
 A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGCTGTCCGT--
--CTGTTCCTGG
 A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

REST/MA0138.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCTGTCCGT---------
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCTGTCCGT
TGCTGACTCA
 A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGCTGTCCGT--------
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCTGTCCGT--
GSCTGTCACTCA
 A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A