p-value: | 1e-9 |
log p-value: | -2.230e+01 |
Information Content per bp: | 1.840 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.68% |
Number of Background Sequences with motif | 2.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 33.6 +/- 26.7bp |
Average Position of motif in Background | 34.3 +/- 19.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCTAGCCTAAATT -BCAGACWA---- |
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PH0175.1_Vax2/Jaspar
Match Rank: | 2 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TCTAGCCTAAATT------- ----GNCTTAATTAGTGNNN |
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SMAD3/MA0795.1/Jaspar
Match Rank: | 3 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCTAGCCTAAATT CGTCTAGACA----- |
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PH0029.1_En2/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCTAGCCTAAATT------- ---TGCACTAATTAGTGGAA |
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Pax6/MA0069.1/Jaspar
Match Rank: | 5 |
Score: | 0.51 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCTAGCCTAAATT AANTCATGCGTGAA-- |
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E2F7/MA0758.1/Jaspar
Match Rank: | 6 |
Score: | 0.50 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TCTAGCCTAAATT TTTTCCCGCCAAAA-- |
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PH0156.1_Rax/Jaspar
Match Rank: | 7 |
Score: | 0.50 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCTAGCCTAAATT------- ---TGCACTAATTAGCGCAC |
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PH0159.1_Rhox6/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCTAGCCTAAATT------- ---TGCCTTAATTAATGCTC |
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PH0133.1_Pax7/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCTAGCCTAAATT------- ---CGAACTAATTAGTACTA |
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PB0171.1_Sox18_2/Jaspar
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCTAGCCTAAATT------ ---GGACTGAATTCATGCC |
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