Information for 14-GTTGASAAYCACA (Motif 30)

A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A
Reverse Opposite:
A C G T A C T G A G C T A C T G C T A G C G A T C G A T A T C G A C G T G T A C C G T A C G T A A G T C
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.790
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.6 +/- 23.7bp
Average Position of motif in Background63.1 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GTTGASAAYCACA---
----NWAACCACADNN
 A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GTTGASAAYCACA--
-----AAACCACANN
 A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GTTGASAAYCACA-
----NAAACCACAG
 A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GTTGASAAYCACA--
-----AAACCACAGC
 A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GTTGASAAYCACA---
-----AAACCACAGAN
 A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GTTGASAAYCACA--
-----AAACCGCAAA
 A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GTTGASAAYCACA-
-----AAACCGCAA
 A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GTTGASAAYCACA---
-----AAATCACAGCA
 A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTTGASAAYCACA-
----CAAATCACTG
 A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GTTGASAAYCACA
TGATTGTTAACAGTTGG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C A T G T C G A T A G C C G T A C G T A G A T C A G T C C T G A A G T C C G T A
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G A C G T