Information for 8-GGAGCTCCDGTCTGAG (Motif 8)

A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G
Reverse Opposite:
G T A C A C G T A G T C C G T A A T C G C T G A G A T C G A T C A C T G A C T G C T G A C T A G A G T C A C G T A T G C A T G C
p-value:1e-13
log p-value:-3.174e+01
Information Content per bp:1.803
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.1 +/- 23.9bp
Average Position of motif in Background47.3 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX1/MA0805.1/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GGAGCTCCDGTCTGAG
-------AGGTGTGA-
 A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GGAGCTCCDGTCTGAG
-------AGGTGTGA-
 A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GGAGCTCCDGTCTGAG
-------AGGTGTGA-
 A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GGAGCTCCDGTCTGAG
-------AGGTGTGA-
 A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GGAGCTCCDGTCTGAG
-------CTGTCTGG-
 A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGAGCTCCDGTCTGAG----
---NNTNNTGTCTGGNNTNG
 A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GGAGCTCCDGTCTGAG
-------AGGTGTGA-
 A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GGAGCTCCDGTCTGAG-
-------AGGTGTGAAA
 A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GGAGCTCCDGTCTGAG
-----VBSYGTCTGG-
 A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GGAGCTCCDGTCTGAG
-------TWGTCTGV-
 A T C G A T C G C G T A A C T G A G T C A G C T A G T C G T A C C T A G C T A G A G C T A T G C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T