Information for 25-KGCTGAGGTCAYK (Motif 50)

A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T
Reverse Opposite:
T G A C C T A G A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A A C T G A G T C G T C A
p-value:1e-3
log p-value:-8.011e+00
Information Content per bp:1.885
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.9 +/- 28.7bp
Average Position of motif in Background43.0 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.77
Offset:3
Orientation:forward strand
Alignment:KGCTGAGGTCAYK
---TRAGGTCA--
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:KGCTGAGGTCAYK
NGATGACGTCAT-
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:KGCTGAGGTCAYK
NRRTGACGTCAT-
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:KGCTGAGGTCAYK
NGRTGACGTCAY-
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:KGCTGAGGTCAYK
NGATGACGTCAT-
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T
A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.72
Offset:3
Orientation:forward strand
Alignment:KGCTGAGGTCAYK
---AGRGGTCA--
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-KGCTGAGGTCAYK
AAGATGATGTCAT-
 A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--KGCTGAGGTCAYK
AAAGATGATGTCATC
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

CREB1/MA0018.2/Jaspar

Match Rank:9
Score:0.71
Offset:3
Orientation:forward strand
Alignment:KGCTGAGGTCAYK
---TGACGTCA--
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.70
Offset:5
Orientation:forward strand
Alignment:KGCTGAGGTCAYK
-----AGGTCA--
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T