Information for 8-CTTGCAAGGT (Motif 28)

A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T
Reverse Opposite:
G C T A A T G C G T A C A C G T C G A T A T C G A G T C C G T A T G C A C T A G
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.844
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif62.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.7 +/- 29.6bp
Average Position of motif in Background47.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTTGCAAGGT---
--TTCAAGGTCAT
 A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CTTGCAAGGT----
----CAAGGHCANV
 A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTTGCAAGGT--
--BTCAAGGTCA
 A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T A C G T A C G T
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTTGCAAGGT-------
TATTCAAGGTCATGCGA
 A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTGCAAGGT
-TTGCCAAG-
 A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCAAGGT--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTTGCAAGGT--
--NTCAAGGTCA
 A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T A C G T A C G T
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTTGCAAGGT---
---TCAAGGTCAT
 A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTTGCAAGGT---
---TCAAGGTCAN
 A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCAAGGT--
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A G T C A C G T A C G T A C T G A T G C G C T A C G T A A C T G A T C G C G A T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G