Information for 15-AGACAAAATTTACTTT (Motif 19)

C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T
Reverse Opposite:
C T G A C T G A G T C A A T C G A C G T C T G A C G T A C G T A G A C T A C G T C G A T A C G T A C T G A G C T A G T C G C A T
p-value:1e-11
log p-value:-2.586e+01
Information Content per bp:1.699
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.0 +/- 31.4bp
Average Position of motif in Background63.1 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:AGACAAAATTTACTTT-
--------TTGACTTTT
 C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGACAAAATTTACTTT--
---TCACTTTCACTTTCN
 C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T A C G T A C G T
A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGACAAAATTTACTTT-
-----ACTTTCACTTTC
 C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AGACAAAATTTACTTT-
-----ACTTTCACTTTC
 C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AGACAAAATTTACTTT-
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

PB0176.1_Sox5_2/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGACAAAATTTACTTT
TATCATAATTAAGGA-
 C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AGACAAAATTTACTTT
-----ATATTTACATA
 C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-AGACAAAATTTACTTT
AAAACAAAGG-------
 A C G T C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:AGACAAAATTTACTTT
-----ATATTTACATA
 C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGACAAAATTTACTTT
GGACTGAATTCATGCC
 C G T A C T A G C T G A G T A C G T C A C G T A G T C A C G T A C G A T C G A T A G C T G T C A A T G C A C G T A G C T A G C T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C