Information for 3-CCTAGTGGCA (Motif 3)

A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A
Reverse Opposite:
C G A T C A T G G A T C G T A C G T C A T A G C G A C T T C G A A C T G C T A G
p-value:1e-16
log p-value:-3.775e+01
Information Content per bp:1.668
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif13.06%
Number of Background Sequences with motif2439.8
Percentage of Background Sequences with motif5.04%
Average Position of motif in Targets50.0 +/- 25.6bp
Average Position of motif in Background50.2 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.68
Offset:-8
Orientation:reverse strand
Alignment:--------CCTAGTGGCA-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCTAGTGGCA-
CCGCCCAAGGGCAG
 A C G T A C G T A C G T A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:-9
Orientation:forward strand
Alignment:---------CCTAGTGGCA-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCTAGTGGCA
TGCCCCAGGGCA
 A C G T A C G T A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCTAGTGGCA
TGCCCCAGGGCA
 A C G T A C G T A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.65
Offset:-11
Orientation:forward strand
Alignment:-----------CCTAGTGGCA
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCTAGTGGCA
TGCCCCCGGGCA
 A C G T A C G T A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGTGGCA
TGCCCNNAGGGCA
 A C G T A C G T A C G T A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCTAGTGGCA
TGCCCTGAGGGCA
 A C G T A C G T A C G T A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCTAGTGGCA
TGCCCTGAGGGCA
 A C G T A C G T A C G T A G T C T G A C A G C T C T G A A T C G C A G T A C T G C T A G G T A C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A