Homer de novo Motif Results (hs_Neuroblastoma_SKNSH_Cancer_MAML3_SRX1035582_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 839
Total background sequences = 46422
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T G A C G T A G A C T A G C T G T C A C T G A C T G A A C G T G A C T G C T A 1e-37-8.690e+0119.79%6.38%26.2bp (34.8bp)Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer(0.935)
More Information | Similar Motifs Found
motif file (matrix)
2 C T A G C G T A A G C T C T G A G C T A G C T A C G T A G C T A T G A C A G T C C G T A A C T G C T G A 1e-35-8.102e+0111.68%2.49%24.3bp (32.8bp)Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer(0.895)
More Information | Similar Motifs Found
motif file (matrix)
3 G A T C T C A G A T G C C G T A C T A G G C T A A C G T G C T A C T G A A T C G 1e-32-7.402e+0125.15%10.58%26.9bp (32.8bp)Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer(0.918)
More Information | Similar Motifs Found
motif file (matrix)
4 A C T G G T C A A C G T C T G A A C G T G C A T C G T A A C G T A G T C G C A T 1e-30-6.959e+019.30%1.83%25.1bp (35.6bp)GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.936)
More Information | Similar Motifs Found
motif file (matrix)
5 G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C 1e-20-4.818e+0118.24%7.98%25.8bp (32.4bp)Bhlha15/MA0607.1/Jaspar(0.816)
More Information | Similar Motifs Found
motif file (matrix)
6 G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C 1e-17-4.101e+0114.30%5.96%28.4bp (34.9bp)PH0063.1_Hoxb8/Jaspar(0.861)
More Information | Similar Motifs Found
motif file (matrix)
7 T A C G T G C A G A C T G C T A G C T A G T A C G T A C G T C A C G A T G A T C 1e-17-4.003e+017.15%1.87%26.8bp (35.8bp)GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.781)
More Information | Similar Motifs Found
motif file (matrix)
8 C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T 1e-15-3.666e+010.83%0.00%20.2bp (0.0bp)Hand1::Tcf3/MA0092.1/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
9 G T A C A C T G A T G C A G T C C G T A A C T G G T C A A C G T A C T G A C T G A G T C A G T C C G A T 1e-14-3.400e+010.95%0.01%13.6bp (16.3bp)NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer(0.781)
More Information | Similar Motifs Found
motif file (matrix)
10 T G C A G C A T C A G T C G T A C A T G A G T C G A C T A T C G C G A T T A C G A C G T C A G T C A T G 1e-13-3.079e+012.86%0.37%24.9bp (27.5bp)POL009.1_DCE_S_II/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)
11 A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A 1e-13-3.069e+010.72%0.00%14.9bp (0.0bp)BARX1/MA0875.1/Jaspar(0.590)
More Information | Similar Motifs Found
motif file (matrix)
12 A C T G A T G C C G T A A T G C A C T G A G T C A G T C C G T A C T A G A G T C G T A C A G T C A T G C 1e-13-3.069e+010.72%0.00%28.7bp (0.0bp)PB0029.1_Hic1_1/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
13 A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T 1e-13-3.069e+010.72%0.00%30.1bp (0.0bp)Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer(0.676)
More Information | Similar Motifs Found
motif file (matrix)
14 T G A C G T A C G C T A C T A G C G T A C T A G T C A G A T G C G A T C C T G A T C A G C G T A C A T G 1e-12-2.920e+017.75%2.74%27.0bp (30.6bp)Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer(0.675)
More Information | Similar Motifs Found
motif file (matrix)
15 A C T G C G T A C G A T A C T G A C G T C T G A C G A T C G T A A C T G C G T A A C G T C T A G G T A C C G T A G C A T A T C G 1e-12-2.900e+010.83%0.01%27.4bp (22.7bp)GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.666)
More Information | Similar Motifs Found
motif file (matrix)
16 G A T C C G T A A C G T C G T A C G A T A C G T C G A T A C G T A T C G C G T A A C G T C G T A C G T A 1e-12-2.850e+010.95%0.02%28.1bp (24.9bp)PB0022.1_Gata5_1/Jaspar(0.681)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T 1e-11-2.609e+011.07%0.03%24.8bp (25.9bp)Hoxd9/MA0913.1/Jaspar(0.769)
More Information | Similar Motifs Found
motif file (matrix)
18 * C T A G T G A C G C A T A C G T A T G C A T G C C T G A A T C G T G A C G A T C 1e-11-2.590e+015.96%1.92%24.4bp (34.7bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.732)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C 1e-10-2.488e+010.60%0.00%27.1bp (0.0bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.603)
More Information | Similar Motifs Found
motif file (matrix)
20 * A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C 1e-10-2.419e+010.83%0.01%21.6bp (26.2bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.659)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G 1e-9-2.242e+010.72%0.01%24.4bp (11.0bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.604)
More Information | Similar Motifs Found
motif file (matrix)
22 * A T G C A G T C C G A T A T C G A G T C A C G T A T C G A G T C A G T C C G T A A C T G A C T G C T G A 1e-9-2.242e+010.72%0.01%32.6bp (27.1bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.651)
More Information | Similar Motifs Found
motif file (matrix)
23 * A T C G C G T A A C G T A C T G A G T C C G A T C T A G G T A C G C T A C T G A C G T A A C G T T G C A C T A G G A T C A G C T 1e-9-2.242e+010.72%0.01%27.1bp (11.7bp)Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer(0.687)
More Information | Similar Motifs Found
motif file (matrix)
24 * A G C T A C G T A C G T G T A C G T A C A C T G A C T G A C G T A T G C A G T C 1e-9-2.227e+013.46%0.82%26.0bp (26.7bp)ETV2/MA0762.1/Jaspar(0.828)
More Information | Similar Motifs Found
motif file (matrix)
25 * A T G C A G T C G A T C A G T C A T C G C A T G C A T G A C T G T A C G G T C A 1e-9-2.180e+012.74%0.53%27.2bp (29.2bp)EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.891)
More Information | Similar Motifs Found
motif file (matrix)
26 * A G C T G T C A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C T G 1e-9-2.143e+010.60%0.00%23.6bp (12.9bp)MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer(0.627)
More Information | Similar Motifs Found
motif file (matrix)
27 * C G T A A T C G A G T C C G T A C G T A C T G A C G T A A T C G C T G A C G T A C T A G C T G A A G T C 1e-9-2.109e+010.72%0.01%23.3bp (24.6bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.584)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C G T G T C A A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C 1e-8-1.925e+010.48%0.00%27.5bp (3.8bp)PB0141.1_Isgf3g_2/Jaspar(0.643)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G 1e-7-1.828e+011.07%0.07%23.5bp (31.7bp)Hoxa9/MA0594.1/Jaspar(0.711)
More Information | Similar Motifs Found
motif file (matrix)
30 * C G A T C T A G T G C A G A T C T G A C C T A G C T G A G C T A C T G A G A T C 1e-7-1.735e+011.19%0.10%25.6bp (30.9bp)PB0036.1_Irf6_1/Jaspar(0.802)
More Information | Similar Motifs Found
motif file (matrix)
31 * C G T A A G T C A C G T A G T C C G T A A G T C C G T A C G A T A C G T C G T A 1e-5-1.350e+010.60%0.02%27.0bp (34.6bp)SD0001.1_at_AC_acceptor/Jaspar(0.633)
More Information | Similar Motifs Found
motif file (matrix)
32 * T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T 1e-4-1.066e+011.55%0.37%27.9bp (35.3bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.623)
More Information | Similar Motifs Found
motif file (matrix)
33 * C G T A T A C G C G T A C T A G C G T A T A C G C G T A A T C G T C G A A T C G T C G A T A G C T C G A T A C G T C A G A T C G 1e-4-1.032e+011.91%0.56%26.1bp (25.7bp)SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar(0.596)
More Information | Similar Motifs Found
motif file (matrix)