Information for 18-CAGGCMWGCT (Motif 32)

T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T
Reverse Opposite:
G T C A A C T G A T G C G C T A C A T G A C T G G A T C G T A C A G C T A T C G
p-value:1e-4
log p-value:-1.066e+01
Information Content per bp:1.643
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif173.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets46.2 +/- 27.9bp
Average Position of motif in Background45.1 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCMWGCT
CNAGGCCT---
 A C G T T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGGCMWGCT-
AAGGCAAGTGT
 T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCMWGCT----
SCAGYCADGCATGAC
 A C G T T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T A C G T A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCMWGCT
RCATTCCWGG-
 A C G T T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCMWGCT
CTAGGCCT---
 A C G T T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCMWGCT
RCATTCCWGG-
 A C G T T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T
C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAGGCMWGCT--
TCCCAGMCRAGCCCC
 A C G T A C G T A C G T T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGGCMWGCT-----
GCAGCCAAGCGTGACN
 A C G T T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T A C G T A C G T A C G T A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGGCMWGCT------
-TNTCCTGCTGTGNNG
 T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAGGCMWGCT----
----CCTGCTGAGH
 T A G C C T G A C A T G C T A G T G A C G T A C C G A T T A C G T G A C C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A