Information for 5-CCCTGGAGCAGACAGC (Motif 19)

A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C
Reverse Opposite:
T A C G A G T C A C G T A C T G C G A T A G T C A C G T A C T G A G T C A G C T A G T C A G T C C G T A A C T G A T C G A C T G
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 27.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CCCTGGAGCAGACAGC
-------CCAGACAG-
 A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CCCTGGAGCAGACAGC-
-------CCAGACRSVB
 A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGAGCAGACAGC
ATGCCCTGAGGC-------
 A C G T A C G T A C G T A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGAGCAGACAGC
TGCCCCAGGGCA------
 A C G T A C G T A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCCTGGAGCAGACAGC---
--CAAATCCAGACATCACA
 A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGAGCAGACAGC
TGCCCCCGGGCA------
 A C G T A C G T A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGAGCAGACAGC
TGCCCCAGGGCA------
 A C G T A C G T A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CCCTGGAGCAGACAGC
-------BCAGACWA-
 A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGAGCAGACAGC
TTGCCCTAGGGCAT-----
 A C G T A C G T A C G T A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGAGCAGACAGC
GRTGMTRGAGCC------
 A C G T A C G T A G T C A T G C A G T C A C G T A C T G C T A G C T G A A C T G A G T C C G T A A C T G C G T A G T A C C G T A A C T G A G T C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T