Information for 15-GATTTATTAG (Motif 29)

A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G
Reverse Opposite:
A T G C A C G T C G T A G T C A A C G T C G T A C G T A T C G A A C G T A G T C
p-value:1e-7
log p-value:-1.828e+01
Information Content per bp:1.914
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif32.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.1 +/- 23.5bp
Average Position of motif in Background50.3 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa9/MA0594.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATTAG
TGATTTATGGC
 A C G T A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GATTTATTAG
TTTTTATTGG
 A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GATTTATTAG-
-TTTTATKRGG
 A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATTAG-
TGATTTATGGCC
 A C G T A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A C G T
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GATTTATTAG-
NTGATTTATGGCC
 A C G T A C G T A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GATTTATTAG-
-TTTTATTRGN
 A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GATTTATTAG
NTTTTATTGG
 A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GATTTATTAG
NTTTTATTGG
 A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

PH0135.1_Phox2a/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GATTTATTAG---
CAGCATTAATTAGTAG
 A C G T A C G T A C G T A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A C G T A C G T A C G T
A G T C T C G A A C T G G T A C T C G A G A C T A G C T C G T A C T G A C G A T A C G T C T G A C T A G A G C T T C A G T A C G

mix-a/MA0621.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GATTTATTAG-
AATTAATTAGT
 A C T G C G T A A G C T A C G T A C G T C G T A A C G T A C G T C G T A A T C G A C G T
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T