Information for 12-GCCTGGCCTGGCT (Motif 13)

A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G T C
p-value:1e-13
log p-value:-3.069e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.9 +/- 30.1bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCTGGCCTGGCT--
GTCATGCHTGRCTGS
 A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCCTGGCCTGGCT
---AGGCCTAG--
 A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCCTGGCCTGGCT
-CNAGGCCT----
 A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCCTGGCCTGGCT
GGGGCCGAGGCCTG---
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGGCCTGGCT--
NGTCACGCTTGGCTGC
 A C G T A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PAX5/MA0014.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCTGGCCTGGCT------
GTCACGCTTGGCTGCNCNN
 A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGGCCTGGCT
ATGCCCGGGCATGT-
 A C G T A C G T A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCCTGGCCTGGCT-
----GGTCTGGCAT
 A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCCTGGCCTGGCT--
GYCTGGYYTNTGTCA
 A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T A C G T A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCCTGGCCTGGCT
-BNTGDCCTTG--
 A C T G A G T C A G T C C G A T A C T G A C T G G T A C G T A C A C G T C T A G A C T G A G T C A C G T
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T