Information for 10-CAGTAATCGCACA (Motif 11)

A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C G T A G C T C G T A G T A C C G A T A C T G
p-value:1e-13
log p-value:-3.069e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.8 +/- 14.9bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARX1/MA0875.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAGTAATCGCACA
--NTAATTGN---
 A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGTAATCGCACA
--NTAATTGG---
 A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A
A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGTAATCGCACA-------
----CGAAGCACACAAAATA
 A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Hmx1/MA0896.1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAGTAATCGCACA-
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAGTAATCGCACA-
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGTAATCGCACA
--TTAATCCG---
 A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGTAATCGCACA
CACTAATT-----
 A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGTAATCGCACA
--CTAATCGNT--
 A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A
A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CAGTAATCGCACA---
-----ATTGCACAATA
 A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PH0061.1_Hoxb6/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGTAATCGCACA--
NNNGTAATTACNNATA
 A C G T A G T C C G T A A C T G A C G T T C G A C G T A A C G T G T A C A C T G A G T C C G T A A G T C C G T A A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A