Information for 16-GTTTTGATTGCAT (Motif 17)

A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T
Reverse Opposite:
C G T A C G A T A C T G A G T C C G T A C G T A C A G T G T A C C G T A C G T A C T G A G T C A A G T C
p-value:1e-11
log p-value:-2.609e+01
Information Content per bp:1.838
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.1 +/- 24.8bp
Average Position of motif in Background66.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd9/MA0913.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GTTTTGATTGCAT
-TTTTTATTGC--
 A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T
A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTTTTGATTGCAT
-NTTTTATTACN-
 A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T
A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GTTTTGATTGCAT
--TTTTATGGCTN
 A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GTTTTGATTGCAT
--TTTTATTGC--
 A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GTTTTGATTGCAT
---TTGATTGN--
 A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTTTTGATTGCAT
-NTTTTATGAC--
 A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTTTGATTGCAT
-TTTTTATTGG--
 A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTTTGATTGCAT
-NTTTTATTGG--
 A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTGATTGCAT-
NGANTTTTATGGCTCN
 A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTGATTGCAT-
NNANTTTTATTGGNNN
 A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C T G G C T A A C G T C G A T C T A G A G T C C G T A C G A T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G