Information for 17-CAGACACMGCWGC (Motif 20)

A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C
Reverse Opposite:
A C T G A T G C C G T A A C T G A G T C A C G T A C T G A C G T A C T G A C G T A T G C A C G T A C T G
p-value:1e-10
log p-value:-2.419e+01
Information Content per bp:1.912
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.9 +/- 21.6bp
Average Position of motif in Background40.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGACACMGCWGC
CCAGACRSVB----
 A C G T A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGACACMGCWGC
CCAGACAG------
 A C G T A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CAGACACMGCWGC
CAAATCCAGACATCACA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGACACMGCWGC
BCAGACWA------
 A C G T A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGACACMGCWGC-
-NGNGACAGCTGCN
 A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CAGACACMGCWGC-
----CGCAGCTGCG
 A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAGACACMGCWGC
---NNACAGCTGC
 A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C
A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CAGACACMGCWGC--
----AACAGCTGCAG
 A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CAGACACMGCWGC--
-----NCAGCTGCTG
 A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CAGACACMGCWGC--
----GACAGCTGCAG
 A G T C C G T A A T C G C G T A A G T C C G T A A G T C G T C A A C T G A G T C C G A T T A C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G