Information for 5-CAKHTGTWAM (Motif 5)

G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C
Reverse Opposite:
C A T G C G A T C G T A C G T A A G T C C G T A C A T G G T C A C G A T A C T G
p-value:1e-20
log p-value:-4.818e+01
Information Content per bp:1.598
Number of Target Sequences with motif153.0
Percentage of Target Sequences with motif18.24%
Number of Background Sequences with motif3705.2
Percentage of Background Sequences with motif7.98%
Average Position of motif in Targets51.8 +/- 25.8bp
Average Position of motif in Background50.3 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CAKHTGTWAM
CCATATGT---
 A C G T G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CAKHTGTWAM
RCCATMTGTT--
 A C G T A C G T G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CAKHTGTWAM
CAGCTGNT--
 G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CAKHTGTWAM
GCCAGCTGBTNB
 A C G T A C G T G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CAKHTGTWAM
NVCAGCTGBBNN
 A C G T A C G T G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CAKHTGTWAM
ACCATCTGTT--
 A C G T A C G T G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CAKHTGTWAM
ACAGCTGTTV-
 A C G T G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CAKHTGTWAM
ACCATATGTT--
 A C G T A C G T G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CAKHTGTWAM
ANCATATGTT--
 A C G T A C G T G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CAKHTGTWAM
NAACAGCTGT---
 A C G T A C G T A C G T G T A C C G T A C A G T G T A C C G A T C T A G G C A T G C A T G C T A G T A C
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T