Information for 3-TTTRTGTCTGGCAAAT (Motif 8)

C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T
Reverse Opposite:
C G T A A C G T C G A T A C G T A C T G G T A C G T A C C G T A A C T G C G T A A T G C C G T A A G C T C G T A G T C A C G T A
p-value:1e-15
log p-value:-3.666e+01
Information Content per bp:1.814
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.3 +/- 20.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TTTRTGTCTGGCAAAT
----GGTCTGGCAT--
 C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTRTGTCTGGCAAAT
NNTNNTGTCTGGNNTNG
 A C G T C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTTRTGTCTGGCAAAT
----TGTCTGDCACCT
 C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTTRTGTCTGGCAAAT
---CTGTCTGG-----
 C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTTRTGTCTGGCAAAT
---CTGTCTGTCACCT
 C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTTRTGTCTGGCAAAT
-VBSYGTCTGG-----
 C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTTRTGTCTGGCAAAT-
-CAATCACTGGCAGAAT
 C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TTTRTGTCTGGCAAAT
--------TGGAAAA-
 C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTTRTGTCTGGCAAAT
---TWGTCTGV-----
 C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TTTRTGTCTGGCAAAT
------NATGGAAAAN
 C G A T A C G T C G A T C T A G A C G T A T C G A C G T A G T C A C G T A C T G A C T G G T A C C G T A C G T A C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T