Information for 18-TAMRTSKGGTCTG (Motif 21)

A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A G T A C A G T C G T C A T A G C C G T A A G T C A C G T C G A T C G T A
p-value:1e-9
log p-value:-2.242e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.5 +/- 24.4bp
Average Position of motif in Background48.5 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TAMRTSKGGTCTG-
----VBSYGTCTGG
 A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TAMRTSKGGTCTG
---CTGTGGTTTN
 A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAMRTSKGGTCTG
-NNHTGTGGTTWN
 A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TAMRTSKGGTCTG-
------CTGTCTGG
 A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TAMRTSKGGTCTG----
-------GGTCTGGCAT
 A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAMRTSKGGTCTG---
NNANTGGTGGTCTTNNN
 A C G T A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TAMRTSKGGTCTG-
------TWGTCTGV
 A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TAMRTSKGGTCTG------
--NNTNNTGTCTGGNNTNG
 A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TAMRTSKGGTCTG
--NNTGTGGTTT-
 A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAMRTSKGGTCTG
--GCTGTGGTTT-
 A C G T C G T A G T C A C T A G A C G T A T C G A C G T A C T G A C T G A C G T A G T C A C G T A C T G
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T