Information for 6-AATTAATTGC (Motif 6)

G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C
Reverse Opposite:
A C T G G A T C G T C A T G C A A C G T A G C T C T G A T C G A C G A T C G A T
p-value:1e-17
log p-value:-4.101e+01
Information Content per bp:1.647
Number of Target Sequences with motif120.0
Percentage of Target Sequences with motif14.30%
Number of Background Sequences with motif2766.4
Percentage of Background Sequences with motif5.96%
Average Position of motif in Targets49.3 +/- 28.4bp
Average Position of motif in Background49.7 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0063.1_Hoxb8/Jaspar

Match Rank:1
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--AATTAATTGC----
TTTATTAATTGCNNGN
 A C G T A C G T G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C A C G T A C G T A C G T A C G T
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:2
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---AATTAATTGC----
GAAAATTAATTACTTCG
 A C G T A C G T A C G T G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C A C G T A C G T A C G T A C G T
C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-AATTAATTGC
ATATTAATTAA
 A C G T G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

Hmx1/MA0896.1/Jaspar

Match Rank:4
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---AATTAATTGC----
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---AATTAATTGC----
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:6
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---AATTAATTGC----
GAAAATTAATTACTTTG
 A C G T A C G T A C G T G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C A C G T A C G T A C G T A C G T
C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:7
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---AATTAATTGC---
AGTAATTAATTACTTC
 A C G T A C G T A C G T G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C A C G T A C G T A C G T
T C G A T C A G G A C T G C T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A A G T C A C G T G A C T A G T C

PH0149.1_Pou3f4/Jaspar

Match Rank:8
Score:0.83
Offset:-4
Orientation:forward strand
Alignment:----AATTAATTGC---
AATTAATTAATTAATTC
 A C G T A C G T A C G T A C G T G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C A C G T A C G T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PH0142.1_Pou1f1/Jaspar

Match Rank:9
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----AATTAATTGC--
GANTTAATTAATTANNN
 A C G T A C G T A C G T A C G T A C G T G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C A C G T A C G T
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C

PH0146.1_Pou3f1/Jaspar

Match Rank:10
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----AATTAATTGC---
AATTAATTAATTAATTC
 A C G T A C G T A C G T A C G T G C T A G C T A A G C T A G C T C T G A T G C A A C G T C A G T C T A G T G A C A C G T A C G T A C G T
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C