Homer de novo Motif Results (hs_ColorectalCarcinoma_HCT116_cancer_USF1_SRX190292_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 765
Total background sequences = 47395
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C C T A G G A T C A G T C G T C A A G T C A G T C G C A T C T A G A T C G A G C T A C T G A C T G A G T C T G A C T C G A 1e-162-3.744e+0218.17%0.52%20.2bp (28.5bp)CTCF/MA0139.1/Jaspar(0.950)
More Information | Similar Motifs Found
motif file (matrix)
2 A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C 1e-89-2.069e+0216.34%1.38%16.7bp (34.0bp)TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer(0.967)
More Information | Similar Motifs Found
motif file (matrix)
3 T C A G C G A T C T A G G C T A T A C G A G C T T G A C G C T A A G T C G C A T 1e-81-1.871e+0216.47%1.67%23.8bp (32.3bp)Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer(0.982)
More Information | Similar Motifs Found
motif file (matrix)
4 A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C 1e-18-4.318e+013.14%0.23%24.7bp (28.4bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.641)
More Information | Similar Motifs Found
motif file (matrix)
5 A G T C A G T C G T C A A G T C C G T A A C T G A C T G A T C G T C G A A G T C C G T A A C T G C T A G A T C G C T G A A C T G 1e-13-3.136e+010.78%0.00%13.5bp (1.4bp)EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer(0.652)
More Information | Similar Motifs Found
motif file (matrix)
6 C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T 1e-12-2.977e+010.92%0.01%28.1bp (23.1bp)PB0104.1_Zscan4_1/Jaspar(0.591)
More Information | Similar Motifs Found
motif file (matrix)
7 * T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T 1e-11-2.756e+016.14%1.81%28.7bp (27.4bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.790)
More Information | Similar Motifs Found
motif file (matrix)
8 * A G T C A C G T A C T G A C T G C T G A A G C T A T C G A G C T A G T C G T C A A G C T C T A G G T A C A C G T A C T G A G T C 1e-11-2.721e+010.78%0.01%28.6bp (7.2bp)PB0029.1_Hic1_1/Jaspar(0.577)
More Information | Similar Motifs Found
motif file (matrix)
9 * C T G A C G A T A C T G A G C T A C T G A C G T A G T C A G C T A G T C C A G T C T G A A T C G G T C A A C T G T A C G A C T G 1e-11-2.623e+010.92%0.01%18.7bp (24.8bp)Bcl6/MA0463.1/Jaspar(0.512)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C 1e-11-2.581e+011.31%0.05%25.5bp (21.7bp)Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer(0.740)
More Information | Similar Motifs Found
motif file (matrix)
11 * G A C T T G C A C G T A A C G T T C G A C T A G C G T A C A G T A G T C A C G T 1e-11-2.577e+011.83%0.14%30.4bp (31.4bp)PB0135.1_Hoxa3_2/Jaspar(0.714)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G T C A C T G A G T C A C T G A G T C A C G T A T G C C G A T A C T G A G T C A G T C C G T A C G T A 1e-11-2.543e+010.65%0.00%19.0bp (0.0bp)NFIA/MA0670.1/Jaspar(0.669)
More Information | Similar Motifs Found
motif file (matrix)
13 * C T G A A G C T G T A C A C T G A C T G C G T A C G T A G T C A A G T C C G A T C T A G A G T C C G T A A C T G A T C G A G T C 1e-11-2.543e+010.65%0.00%21.1bp (0.0bp)PB0033.1_Irf3_1/Jaspar(0.572)
More Information | Similar Motifs Found
motif file (matrix)
14 * C G T A A G C T A G C T A C T G A G T C G A C T T C G A C G A T A C G T A C G T A G T C A C G T C A T G A G T C A T G C G T C A 1e-11-2.543e+010.65%0.00%25.1bp (17.6bp)Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer(0.589)
More Information | Similar Motifs Found
motif file (matrix)
15 * C G T A C G T A C G T A A C T G C G T A A T C G A G T C C G T A C G T A C G T A A C T G A C T G T G A C C A G T G A C T A G T C 1e-11-2.543e+010.65%0.00%32.8bp (0.0bp)Tcf7/MA0769.1/Jaspar(0.804)
More Information | Similar Motifs Found
motif file (matrix)
16 * T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A 1e-10-2.442e+011.83%0.15%30.7bp (34.5bp)Crx/MA0467.1/Jaspar(0.659)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A C T A G T C A G T C G A C T G A T C G A T A G C C G T A A T C G A T C G G T A C T G C A T A C G A G C T C T A G A T C G 1e-10-2.376e+011.44%0.08%18.9bp (24.6bp)ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer(0.622)
More Information | Similar Motifs Found
motif file (matrix)
18 * A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C 1e-10-2.349e+011.31%0.06%25.4bp (18.3bp)PB0029.1_Hic1_1/Jaspar(0.624)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G C G A T A C G T C G T A A G T C C G A T A T G C A C G T A T G C C G T A A C T G A C G T G T A C A G C T A G T C G T A C 1e-10-2.308e+010.78%0.01%18.9bp (25.7bp)PB0140.1_Irf6_2/Jaspar(0.551)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G A T C T A G G T C A G T C A A C G T A T C G C G T A A T C G A G T C G A C T T A G C A G T C A T G C G A T C A G T C A T G C 1e-9-2.298e+010.92%0.02%21.4bp (35.8bp)Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.654)
More Information | Similar Motifs Found
motif file (matrix)
21 * A T G C G T A C A T C G T C A G C G T A T G C A A T C G A G C T A T C G G T A C 1e-9-2.237e+012.35%0.33%23.6bp (25.2bp)Gabpa/MA0062.2/Jaspar(0.913)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G A T T A G C A G T C G T A C A G T C G A C T A T C G C G T A A G T C A C T G A C G T A C T G A C T G A C T G A G T C C G A T 1e-9-2.198e+010.65%0.00%18.3bp (14.8bp)XBP1/MA0844.1/Jaspar(0.590)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C G T A T G C C G T A A C G T A G T C G T C A C T G A A T C G A G C T A C T G A C G T A G T C C T G A 1e-8-2.069e+011.18%0.06%22.5bp (26.0bp)Myb/MA0100.2/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C T G A T C G C G T A A C T G A G C T A C T G A C T G A G T C A C T G A G T C A G T C G T A C A C G T 1e-8-1.997e+010.65%0.01%17.5bp (27.2bp)POL006.1_BREu/Jaspar(0.649)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C G T C A A G T C A T C G G T A C A G T C C G A T T A C G T G A C C G T A A C G T A C G T A G T C G T A C C G T A C G T A 1e-8-1.997e+010.65%0.01%25.4bp (17.0bp)LIN54/MA0619.1/Jaspar(0.635)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C G T A C T G A G T C C G T A A C G T A G T C C G T A C G T A A C T G C T G A A T C G C G T A C G T A 1e-8-1.970e+010.52%0.00%35.7bp (0.0bp)Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer(0.625)
More Information | Similar Motifs Found
motif file (matrix)
27 * C G T A A G T C G T A C A C G T A G T C C G T A G T A C A C T G A C T G A C T G A C T G C G T A A T G C 1e-8-1.970e+010.52%0.00%30.7bp (0.0bp)MZF1/MA0056.1/Jaspar(0.640)
More Information | Similar Motifs Found
motif file (matrix)
28 * A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A 1e-8-1.970e+010.52%0.00%28.6bp (34.9bp)PB0195.1_Zbtb3_2/Jaspar(0.627)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C G T A G T C C G T A A C T G A G T C G T A C G T C A A G T C A C G T G A C T A C T G A T C G A G T C G T A C C T A G T G C A 1e-8-1.970e+010.52%0.00%24.8bp (0.0bp)NRL/MA0842.1/Jaspar(0.633)
More Information | Similar Motifs Found
motif file (matrix)
30 * A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A G T C C G A T A C T G A C G T A T C G 1e-8-1.854e+010.65%0.01%35.5bp (12.6bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.624)
More Information | Similar Motifs Found
motif file (matrix)
31 * A T G C A G T C G T A C A C T G G T C A A G T C C T G A A G T C A C T G A G T C A G T C A C T G G T C A 1e-8-1.854e+010.65%0.01%25.3bp (21.9bp)PB0180.1_Sp4_2/Jaspar(0.674)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T 1e-7-1.824e+011.05%0.05%27.8bp (21.0bp)LIN54/MA0619.1/Jaspar(0.653)
More Information | Similar Motifs Found
motif file (matrix)
33 * C G T A T C A G C T G A A G C T A G T C C G T A A C T G T A G C G A C T A C T G 1e-7-1.791e+012.09%0.34%26.5bp (29.2bp)TFAP4/MA0691.1/Jaspar(0.812)
More Information | Similar Motifs Found
motif file (matrix)
34 * C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C 1e-7-1.767e+010.78%0.02%13.5bp (26.5bp)NFIC/MA0161.1/Jaspar(0.573)
More Information | Similar Motifs Found
motif file (matrix)
35 * A T C G C G T A G C T A A G T C G T C A C A G T A C G T A C T G A C T G A G T C C G T A C T A G C G T A A C T G C A G T C G T A 1e-7-1.694e+010.52%0.01%22.4bp (18.8bp)SOX21/MA0866.1/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
36 * A C G T A C T G C T G A C G T A A C G T A C T G C G T A C G T A G T A C C G T A C G T A A C T G C T A G 1e-7-1.654e+010.65%0.01%28.4bp (10.6bp)PB0028.1_Hbp1_1/Jaspar(0.656)
More Information | Similar Motifs Found
motif file (matrix)
37 * A G T C C G A T A C G T C G A T A G T C C G T A A C T G A G T C A G T C A C G T A G T C C G A T C A G T 1e-7-1.654e+010.65%0.01%14.0bp (19.7bp)IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer(0.667)
More Information | Similar Motifs Found
motif file (matrix)
38 * C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G 1e-6-1.533e+010.52%0.01%20.0bp (2.9bp)bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer(0.649)
More Information | Similar Motifs Found
motif file (matrix)
39 * C T A G C T A G T G C A A C G T A T G C G A T C T A G C A C G T A C T G A T G C T A C G C A G T A C G T 1e-6-1.531e+011.18%0.11%25.6bp (29.8bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.573)
More Information | Similar Motifs Found
motif file (matrix)
40 * A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A 1e-5-1.257e+013.01%0.98%26.6bp (27.7bp)MZF1/MA0056.1/Jaspar(0.713)
More Information | Similar Motifs Found
motif file (matrix)