Information for 2-NRGTCACGTGACH (Motif 2)

A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C
Reverse Opposite:
C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C T A G C
p-value:1e-89
log p-value:-2.069e+02
Information Content per bp:1.632
Number of Target Sequences with motif125.0
Percentage of Target Sequences with motif16.34%
Number of Background Sequences with motif652.1
Percentage of Background Sequences with motif1.38%
Average Position of motif in Targets53.4 +/- 16.7bp
Average Position of motif in Background50.1 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:NRGTCACGTGACH
BRGTCACGTGAC-
 A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C A C G T

TFEB/MA0692.1/Jaspar

Match Rank:2
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:NRGTCACGTGACH
--GTCACGTGAT-
 A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C
A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:3
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:NRGTCACGTGACH
--NTCACGTGAT-
 A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C
A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G C G A T A C T G G T C A A G C T A C G T

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NRGTCACGTGACH
-GGTCACGTGGC-
 A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:5
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:NRGTCACGTGACH
--GTCACGTGAC-
 A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C
A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C A C G T

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:NRGTCACGTGACH
-GGTCACATGAC-
 A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.94
Offset:1
Orientation:forward strand
Alignment:NRGTCACGTGACH
-GGTCACGTGA--
 A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C
A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:NRGTCACGTGACH
--GTCACGTGNT-
 A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C
A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.94
Offset:2
Orientation:forward strand
Alignment:NRGTCACGTGACH
--GTCACGTGGT-
 A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C
A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:10
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:NRGTCACGTGACH
--GTCACGTGAT-
 A T C G C T A G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C G A T C
A C G T A C G T T C A G C G A T A T G C C T G A A T G C T A C G G A C T A C T G C G T A A G C T A C G T