Information for 5-CAGCGCCMTCTSC (Motif 4)

A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C
Reverse Opposite:
T C A G A T G C T C G A A C T G C T G A A C T G C T A G A C T G A G T C A C T G A G T C A G C T A C T G
p-value:1e-18
log p-value:-4.318e+01
Information Content per bp:1.804
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif109.6
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets52.0 +/- 24.7bp
Average Position of motif in Background51.9 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAGCGCCMTCTSC----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAGCGCCMTCTSC
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAGCGCCMTCTSC
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGCGCCMTCTSC------
TAGCGCCCCCTGGTGGCCA
 A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGCCMTCTSC
TGCCTGCGYCMCCTT-
 A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGCGCCMTCTSC
AGCGCGCC------
 A C G T A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCGCCMTCTSC--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGCGCCMTCTSC------
ANAGTGCCACCTGGTGGCCA
 A C G T A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGCGCCMTCTSC
CCCCCGCCCCCGCC
 A C G T A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGCCMTCTSC
GCTCCGCCCMCY--
 A C G T A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T T A C G A G T C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T