Information for 17-GTCACTGGTGTTA (Motif 28)

A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A G T A C C G T A G T A C A G T C C G T A A C T G A C G T A C T G C T G A A T G C
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.2 +/- 28.6bp
Average Position of motif in Background32.5 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCACTGGTGTTA-
CAATCACTGGCAGAAT
 A C G T A C G T A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PKNOX2/MA0783.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCACTGGTGTTA
-TGACAGGTGTCA
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A
A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

PKNOX1/MA0782.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTCACTGGTGTTA
-TGACAGGTGTCA
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A
A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GTCACTGGTGTTA
-----AGGTGTGA
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTCACTGGTGTTA
AGTCACGC------
 A C G T A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GTCACTGGTGTTA
-----AGGTGTGA
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GTCACTGGTGTTA
-----AGGTGTGA
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GTCACTGGTGTTA--
-----AGGTGTTAAT
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTCACTGGTGTTA
--AACAGGTGNT-
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A
A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTCACTGGTGTTA
-TGACAGCTGTCA
 A T C G A G C T A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T C G T A
A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A