Information for 9-AGCTCCKCCT (Motif 7)

T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T
Reverse Opposite:
C T G A A T C G A T C G G T C A A C T G A T C G C T G A A T C G A G T C A G C T
p-value:1e-11
log p-value:-2.756e+01
Information Content per bp:1.752
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif6.14%
Number of Background Sequences with motif855.0
Percentage of Background Sequences with motif1.81%
Average Position of motif in Targets49.2 +/- 28.7bp
Average Position of motif in Background49.8 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:AGCTCCKCCT---
-GCTCCGCCCMCY
 T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T A C G T A C G T A C G T
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCCKCCT---
NAGCCCCGCCCCCN
 A C G T T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T A C G T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGCTCCKCCT--
-GCCCCGCCCCC
 T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T A C G T A C G T
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGCTCCKCCT--
GGCCCCGCCCCC
 T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T A C G T A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGCTCCKCCT
-GCTCCG---
 T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AGCTCCKCCT------
-GCCCCGCCCCCTCCC
 T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGCTCCKCCT-
-GCCCCGCCCC
 T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T A C G T
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGCTCCKCCT----
NRGCCCCRCCCHBNN
 A C G T T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T A C G T A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGCTCCKCCT
CNGTCCTCCC
 T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGCTCCKCCT---
NNGGCCACGCCTTTN
 A C G T A C G T T C G A C T A G T A G C A G C T A T G C G T A C C A G T A T G C T A G C A G C T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G