Information for 11-CACATGATYA (Motif 16)

T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A
Reverse Opposite:
C A G T T C G A T G C A C A G T T G A C G C T A C G A T A C T G C G A T A C T G
p-value:1e-10
log p-value:-2.442e+01
Information Content per bp:1.589
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif71.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets44.5 +/- 30.7bp
Average Position of motif in Background45.5 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CACATGATYA-
AAGAGGATTAG
 T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0016.1_Cux1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CACATGATYA------
TNAGNTGATCAACCGGT
 A C G T T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACATGATYA
TAATTGATTA
 T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CACATGATYA-
---RGGATTAR
 T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A A C G T
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

Dmbx1/MA0883.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACATGATYA-----
TGAACCGGATTAATGAA
 A C G T A C G T T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACATGATYA-----
TGAACCGGATTAATGAA
 A C G T A C G T T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CACATGATYA-
---NGGATTAA
 T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A A C G T
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PH0126.1_Obox6/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACATGATYA---
AAAAACGGATTATTG
 A C G T A C G T T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CACATGATYA-
---GGGATTAA
 T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A A C G T
A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACATGATYA
NTAATBNAATTA
 A C G T A C G T T G A C C G T A T G A C G C T A C G A T A C T G G T C A A C G T A G C T G T C A
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A