Information for 6-KAGGTGAAMAGATACT (Motif 6)

C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T
Reverse Opposite:
C G T A A C T G A C G T T C G A C G A T T A G C C G A T A C T G C G A T A C G T A G T C G C T A A G T C G T A C A G C T G T A C
p-value:1e-12
log p-value:-2.977e+01
Information Content per bp:1.716
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.7 +/- 28.1bp
Average Position of motif in Background43.8 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KAGGTGAAMAGATACT
TACATGTGCACATAAAA-
 A C G T A C G T C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:KAGGTGAAMAGATACT
-AGATGKDGAGATAAG
 C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T
A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--KAGGTGAAMAGATACT
CAGATGTGCACATACGT-
 A C G T A C G T C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:KAGGTGAAMAGATACT
-AGGTGTTAAT-----
 C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:KAGGTGAAMAGATACT--
-ANNNGGATATATCCNNN
 C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T A C G T A C G T
A C G T G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:KAGGTGAAMAGATACT-
---GAGAACCGAAACTG
 C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T A C G T
A C G T A C G T A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-KAGGTGAAMAGATACT
GGAGGGGGAA-------
 A C G T C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----KAGGTGAAMAGATACT
ATCCACAGGTGCGAAAA----
 A C G T A C G T A C G T A C G T A C G T C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:KAGGTGAAMAGATACT-
---AAGATAAGATAACA
 C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T A C G T
A C G T A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:KAGGTGAAMAGATACT--
---GGAAANTGAAACTNA
 C A T G C T G A A C T G A C T G C G A T A C T G T G C A C G T A T G A C C G T A A C T G C G T A A C G T G T C A A G T C G C A T A C G T A C G T
A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A