Information for 20-TTCAAAAGYARCT (Motif 32)

A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T
Reverse Opposite:
T G C A A C T G G A C T A C G T C T A G A G T C A C G T C A G T A G C T A C G T A C T G C T G A C G T A
p-value:1e-7
log p-value:-1.824e+01
Information Content per bp:1.761
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif25.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets38.2 +/- 27.8bp
Average Position of motif in Background42.7 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTCAAAAGYARCT
NATTCAAAT------
 A C G T A C G T A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TTCAAAAGYARCT
CGGTTTCAAA-------
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAAGYARCT
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAAGYARCT--
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTCAAAAGYARCT
DCYAAAAATAGM-
 A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAAGYARCT
GGTTAAACATTAA--
 A C G T A C G T A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAAGYARCT
ACATCAAAGG-----
 A C G T A C G T A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAAGYARCT
ACWTCAAAGG-----
 A C G T A C G T A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTCAAAAGYARCT--
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TTCAAAAGYARCT
TATAGATCAAAGGAAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A C T G A G T C A G T C A C T A G A G T C C G T A C T G A T G A C A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T