Information for 7-TTAGTCACATTTC (Motif 10)

C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C
Reverse Opposite:
T A C G C T G A C G T A C G T A A G C T C A T G C G A T C T A G G C T A A G T C A G C T G C T A G C T A
p-value:1e-11
log p-value:-2.581e+01
Information Content per bp:1.708
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif22.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.4 +/- 25.5bp
Average Position of motif in Background41.6 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TTAGTCACATTTC
-GKVTCADRTTWC
 C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C
A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTAGTCACATTTC
-GKMTCADRTTWC
 C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C
A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

Hes2/MA0616.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTAGTCACATTTC----
----GCACGTGTCNNNN
 C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TTAGTCACATTTC---
----TGACCTTTNCNT
 C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTAGTCACATTTC
--GGTCACATGAC
 C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C
A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTAGTCACATTTC------
NTGACTCANTTTTTCCANTN
 A C G T C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

JUN(var.2)/MA0489.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTAGTCACATTTC
ATGAGTCATNTNNT
 A C G T C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTAGTCACATTTC--
-NNGTANTGTTTTNC
 C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C A C G T A C G T
A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTAGTCACATTTC
---GTCACGTGGM
 C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

USF1/MA0093.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTAGTCACATTTC
--GGTCACGTGGC
 C G A T C G A T T C G A T C A G C A G T A G T C C G T A G T A C T C G A A C G T A C G T A G C T A T G C
A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C