Information for 17-TCCCCTGAMA (Motif 40)

A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A
Reverse Opposite:
A G C T A C T G C G A T A G T C C T G A A C T G T A C G A C T G C T A G C G T A
p-value:1e-5
log p-value:-1.257e+01
Information Content per bp:1.761
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif463.6
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets53.4 +/- 26.6bp
Average Position of motif in Background53.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TCCCCTGAMA
TCCCCA----
 A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCCCCTGAMA
CGCCCCCTGACA
 A C G T A C G T A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCCCCTGAMA--
TCCCNNGGGACN
 A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A A C G T A C G T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCCCCTGAMA
TGCCCAGNHW
 A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCTGAMA
TTCCTCT----
 A C G T A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A
C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCCCCTGAMA--
TCCCCTGGGGAC
 A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A A C G T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

EBF1/MA0154.3/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCCCCTGAMA--
ATTCCCAAGGGAAT
 A C G T A C G T A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A A C G T A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCCCTGAMA--
--VGCTGWCAVB
 A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A A C G T A C G T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

HINFP/MA0131.2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCCCCTGAMA
CAACGTCCGCGG---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCCCTGAMA
TTTCCTGGAAA
 A C G T A C G T A G T C A G T C A T G C A G T C G A C T A C T G G C T A T G A C C T G A
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A