Information for 20-GCYCYGAGCCMTTGGC (Motif 34)

C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C
Reverse Opposite:
A T C G A G T C A T G C T G C A G C T A A C T G A T C G A C T G A T G C C A G T A G T C T C G A C T A G T C A G A T C G A G T C
p-value:1e-7
log p-value:-1.767e+01
Information Content per bp:1.740
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.5 +/- 13.5bp
Average Position of motif in Background61.1 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.57
Offset:11
Orientation:forward strand
Alignment:GCYCYGAGCCMTTGGC-
-----------TTGGCA
 C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:GCYCYGAGCCMTTGGC---
----------NTTGGCANN
 C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GCYCYGAGCCMTTGGC-
------AGCCTCAGGCA
 C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GCYCYGAGCCMTTGGC-
------AGCCTCAGGCA
 C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GCYCYGAGCCMTTGGC-
-------CCGATTGGCT
 C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCYCYGAGCCMTTGGC-
------CGCCTCAGGCA
 C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCYCYGAGCCMTTGGC
GGCCCCGCCCCC-----
 A C G T C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCYCYGAGCCMTTGGC---
----ATTGCCTCAGGCAAT
 C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GCYCYGAGCCMTTGGC----
--------TGATTGGCTANN
 C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCYCYGAGCCMTTGGC---
----ATTGCCTGAGGCAAT
 C T A G A T G C A G T C A G T C A G C T A C T G G T C A A T C G G T A C A T G C T G A C C G A T A C G T A T C G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T