Information for 10-CNTGCAAGCCTCC (Motif 18)

A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A A C T G A C T G A G T C A G C T C G A T A C T G A G T C C G T A A G T C A T C G
p-value:1e-10
log p-value:-2.349e+01
Information Content per bp:1.848
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif28.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.3 +/- 25.4bp
Average Position of motif in Background44.3 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CNTGCAAGCCTCC-
ACTATGCCAACCTACC
 A C G T A C G T A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CNTGCAAGCCTCC
-ATGCCAACC---
 A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CNTGCAAGCCTCC------
--TACGAGACTCCTCTAAC
 A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CNTGCAAGCCTCC-
WCATTTTGKCCTCYT
 A C G T A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CNTGCAAGCCTCC
----CAAGCTT--
 A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CNTGCAAGCCTCC
-----CAGCC---
 A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CNTGCAAGCCTCC
----BCAGACWA-
 A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CNTGCAAGCCTCC
--AGCGCGCC---
 A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CNTGCAAGCCTCC
-NNACTTGCCTT-
 A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CNTGCAAGCCTCC
---CNAGGCCT--
 A T G C A C T G C G A T A C T G A G T C G C T A C T G A A C T G A G T C A G T C A C G T A G T C A G T C
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T