Information for 24-AAGTCAGACTGAG (Motif 38)

C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G
Reverse Opposite:
A T G C C A G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G C G T A A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.533e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.0 +/- 20.0bp
Average Position of motif in Background10.8 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAGTCAGACTGAG----
WNAGTCADAVTGAAACTN
 A C G T C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGTCAGACTGAG-
NAGGTCACNNTGACC
 A C G T C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAGTCAGACTGAG
AAAAGTCAA------
 A C G T A C G T C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGTCAGACTGAG--
AGGTCACCCTGACCT
 C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAGTCAGACTGAG--
BAGTCATANTGAAAG
 C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAGTCAGACTGAG
---BCAGACWA--
 C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAGTCAGACTGAG
---CCAGACAG--
 C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGTCAGACTGAG
ATGCCAGACN---
 C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGTCAGACTGAG---
CAGGTCACCGTGACCTT
 A C G T C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAGTCAGACTGAG
---CCAGACRSVB
 C G T A C G T A A C T G A C G T A G T C C G T A A C T G G T C A A G T C A C G T A C T G G T C A A T C G
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C