Homer de novo Motif Results (hs_ColonAdenocarcinoma_LoVo_undef_TCF3_SRX335319_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 19
Total background sequences = 46583
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T 1e-10-2.499e+0121.05%0.03%21.5bp (25.7bp)Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer(0.582)
More Information | Similar Motifs Found
motif file (matrix)
2 * C G A T A C G T A C G T A C G T C G T A A C G T G T C A C G T A C G T A C G T A A G C T A G T C A G C T 1e-10-2.485e+0126.32%0.11%23.9bp (26.9bp)PB0125.1_Gata3_2/Jaspar(0.656)
More Information | Similar Motifs Found
motif file (matrix)
3 * A G T C A C G T A T C G A T G C A C G T A G C T A C G T A C T G A T C G C G T A A C T G A C G T G T A C C G T A C T A G C G A T 1e-10-2.318e+0115.79%0.01%22.5bp (38.9bp)TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer(0.638)
More Information | Similar Motifs Found
motif file (matrix)
4 * A C G T C T A G A C T G A C G T C G A T C G T A G T C A C G A T A C T G C T G A A C T G A G T C A C G T A G T C A C G T A G C T 1e-9-2.290e+0126.32%0.16%16.1bp (34.7bp)ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer(0.601)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C G T A C T G C T G A A T C G A C T G A G T C A C G T C T A G A T C G C G T A C T A G A T G C C T A G 1e-9-2.140e+0121.05%0.06%18.4bp (39.3bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.691)
More Information | Similar Motifs Found
motif file (matrix)
6 * T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C 1e-9-2.110e+0115.79%0.01%2.2bp (20.1bp)TFAP2B/MA0811.1/Jaspar(0.581)
More Information | Similar Motifs Found
motif file (matrix)
7 * A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T 1e-8-2.043e+0115.79%0.01%18.5bp (30.2bp)EBF1/MA0154.3/Jaspar(0.620)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A 1e-8-2.004e+0121.05%0.09%28.1bp (24.6bp)SD0002.1_at_AC_acceptor/Jaspar(0.505)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T C T G A A G T C C G T A A T C G T A C G A C G T A T G C C G T A A C T G C G T A C G A T C G T A G T C A G T C A C G T A 1e-8-1.988e+0115.79%0.01%13.8bp (28.7bp)Mecom/MA0029.1/Jaspar(0.525)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G T C C T G A T A G C G T C A A G C T A G C T T C G A G A T C A G T C A G T C T G A C G T C A C T A G C A T G A T C G C G T A 1e-8-1.964e+0121.05%0.10%11.8bp (34.6bp)GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer(0.633)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C G T C G T A C G T A G A T C G A T C A C G T A G C T A G T C C G A T C T A G A T C G C T G A C G A T G A C T A C G T A C G T 1e-8-1.871e+0121.05%0.12%20.0bp (34.7bp)HSF2/MA0770.1/Jaspar(0.505)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C G T C G T A A C T G C G T A A C T G A C G T A C G T C G T A C G T A C T A G 1e-8-1.857e+0121.05%0.12%20.7bp (33.3bp)PB0021.1_Gata3_1/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C T G C T G A A C T G C G T A A C T G A C G T G T C A C G T A C T G A C G T A A T G C C G T A A C T G 1e-7-1.757e+0115.79%0.03%14.4bp (21.3bp)CHR(?)/Hela-CellCycle-Expression/Homer(0.601)
More Information | Similar Motifs Found
motif file (matrix)
14 * C G T A A G T C G T C A G T C A C G T A A G T C A T G C A G C T T A G C A C G T A C T G C T G A C T G A 1e-7-1.714e+0115.79%0.03%9.0bp (20.3bp)ZBTB18/MA0698.1/Jaspar(0.590)
More Information | Similar Motifs Found
motif file (matrix)
15 * C G T A C G T A A T G C G T A C A C G T T G A C G T A C C G A T A G C T C G A T A C T G A C T G C T G A 1e-7-1.643e+0115.79%0.04%13.9bp (19.6bp)NFIC/MA0161.1/Jaspar(0.594)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A A T G C A C T G A C G T A C G T A T C G C G T A T G C A G C A T C T A G A C T G C T G A A C T G A C T G A G T C A C G T 1e-7-1.628e+0110.53%0.00%3.0bp (13.4bp)LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer(0.595)
More Information | Similar Motifs Found
motif file (matrix)
17 * G A C T C G T A A C T G C T G A A C G T A G T C G C A T C G T A G T C A A C G T C T G A A C T G C G T A A C G T A C G T A C G T 1e-7-1.628e+0110.53%0.00%7.5bp (0.0bp)Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer(0.575)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A 1e-6-1.599e+0115.79%0.05%17.6bp (26.4bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.522)
More Information | Similar Motifs Found
motif file (matrix)
19 * C G T A A G T C C G T A C T A G A C T G G T A C C G T A A T C G C T G A A C T G C G T A C T G A C G T A 1e-6-1.561e+0115.79%0.06%12.3bp (34.5bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.620)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G 1e-6-1.540e+0121.05%0.27%12.7bp (28.4bp)MEF2C/MA0497.1/Jaspar(0.724)
More Information | Similar Motifs Found
motif file (matrix)
21 * A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G 1e-6-1.506e+0115.79%0.07%19.2bp (29.6bp)PH0106.1_Msx1/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C C G T A A C G T A G C T A C T G A C G T C G T A G T C A C G T A A G T C G T C A A C G T C T G A 1e-6-1.460e+0115.79%0.08%8.5bp (35.2bp)FOXD1/MA0031.1/Jaspar(0.691)
More Information | Similar Motifs Found
motif file (matrix)
23 * T A C G A C T G G A C T G C T A T C A G G T C A G C T A G T A C A C G T A C T G C G T A C A T G A T C G G T C A C G T A G C A T 1e-6-1.430e+0121.05%0.36%28.9bp (27.2bp)PB0042.1_Mafk_1/Jaspar(0.559)
More Information | Similar Motifs Found
motif file (matrix)
24 * T A G C A T C G A T G C T C A G T C G A A G T C C A G T A G C T G T C A A C G T T G A C G A C T A T C G 1e-6-1.411e+0121.05%0.38%9.3bp (29.2bp)Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer(0.663)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C G T A G T C A T C G G A C T C T A G A C T G T A G C T G A C T G C A C G T A A C T G A C T G C T A G A G T C A T C G C T G A 1e-5-1.336e+0115.79%0.12%5.4bp (28.5bp)PLAG1/MA0163.1/Jaspar(0.564)
More Information | Similar Motifs Found
motif file (matrix)
26 * C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C 1e-5-1.314e+0115.79%0.13%27.0bp (31.9bp)POL008.1_DCE_S_I/Jaspar(0.515)
More Information | Similar Motifs Found
motif file (matrix)
27 * G T A C C G T A G T A C G T A C G T A C C G T A G T A C A G T C A G C T G A T C G C A T T G A C G C T A T C G A C G T A G A T C 1e-5-1.309e+0115.79%0.13%14.2bp (30.8bp)PB0130.1_Gm397_2/Jaspar(0.560)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C T G A C G T A C G T C G T A C T G A C T A G A C T G C G A T A C G T A C T G C G T A C G T A C G A T 1e-5-1.284e+0115.79%0.14%28.9bp (33.7bp)PH0113.1_Nkx2-4/Jaspar(0.577)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G 1e-4-1.127e+0115.79%0.24%16.3bp (27.6bp)PB0182.1_Srf_2/Jaspar(0.564)
More Information | Similar Motifs Found
motif file (matrix)
30 * C G T A A G T C A C G T A C G T C T A G A G T C G T A C A C G T A G C T A C G T A C G T A T C G A G T C 1e-4-1.087e+0110.53%0.04%27.0bp (30.2bp)SD0002.1_at_AC_acceptor/Jaspar(0.648)
More Information | Similar Motifs Found
motif file (matrix)
31 * T G A C C A G T C G T A C A T G C G T A T G C A C G T A A G T C C G T A C T A G C G A T A C G T A G C T A G T C C G T A G T C A 1e-4-1.037e+0115.79%0.32%26.5bp (32.8bp)DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer(0.570)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C G T C A G T C A G T T C A G G C A T T A C G C A T G C A G T C G A T C G A T C G T A A C G T C T A G 1e-4-1.024e+0121.05%1.01%10.6bp (32.7bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.729)
More Information | Similar Motifs Found
motif file (matrix)
33 * C G T A C G T A C G A T A C G T C G T A A C G T C G A T G T A C A G T C A C T G 1e-4-9.771e+0010.53%0.06%8.5bp (40.8bp)GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.635)
More Information | Similar Motifs Found
motif file (matrix)
34 * C T A G C A G T G T A C C T A G A C T G C G T A A T C G C T A G C G A T A T G C A T C G C G A T A C T G A C T G C G T A A T C G 1e-3-8.391e+0010.53%0.12%2.9bp (31.1bp)ZNF354C/MA0130.1/Jaspar(0.597)
More Information | Similar Motifs Found
motif file (matrix)
35 * A G T C A C G T C G T A A C T G C G T A A C G T A G T C C G T A A C G T A C T G 1e-3-7.767e+005.26%0.00%0.0bp (12.1bp)ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer(0.681)
More Information | Similar Motifs Found
motif file (matrix)
36 * C G T A A G T C A C T G A C T G A C T G A C T G A G T C A G T C A C G T A C G T 1e-3-7.767e+005.26%0.00%0.0bp (9.8bp)ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.672)
More Information | Similar Motifs Found
motif file (matrix)
37 * C G T A A G T C C G T A C G T A A C T G C G T A C G T A C G T A A G T C A C T G 1e-3-7.767e+005.26%0.00%0.0bp (4.2bp)EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer(0.675)
More Information | Similar Motifs Found
motif file (matrix)
38 * A C G T A G T C A G T C A G T C A C T G C G T A C G T A A C G T A C T G A C T G 1e-3-7.767e+005.26%0.00%0.0bp (0.0bp)PB0024.1_Gcm1_1/Jaspar(0.613)
More Information | Similar Motifs Found
motif file (matrix)
39 * A C G T C G T A A G T C C G T A C G T A A C G T A G T C A G T C A C G T A C T G 1e-3-7.767e+005.26%0.00%0.0bp (22.5bp)TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer(0.701)
More Information | Similar Motifs Found
motif file (matrix)
40 * A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G 1e-3-7.767e+005.26%0.00%0.0bp (0.0bp)T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer(0.557)
More Information | Similar Motifs Found
motif file (matrix)
41 * A C G T A G T C A C T G A C G T A C T G A C T G A G T C A G T C A C T G C G T A 1e-3-7.767e+005.26%0.00%0.0bp (0.0bp)EGR2/MA0472.2/Jaspar(0.609)
More Information | Similar Motifs Found
motif file (matrix)
42 * A C G T A G T C C G T A A C G T A G T C A C G T A C T G A C G T A G T C A C T G 1e-3-7.767e+005.26%0.00%0.0bp (0.0bp)NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer(0.737)
More Information | Similar Motifs Found
motif file (matrix)
43 * A C T G A C G T C G T A A C G T A C T G A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C 1e-3-7.767e+005.26%0.00%0.0bp (0.0bp)GLI2/MA0734.1/Jaspar(0.583)
More Information | Similar Motifs Found
motif file (matrix)
44 * A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A G T C A C G T A G T C A C G T A G T C 1e-3-7.767e+005.26%0.00%0.0bp (0.0bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.607)
More Information | Similar Motifs Found
motif file (matrix)
45 * C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T 1e-3-7.767e+005.26%0.00%0.0bp (0.0bp)SD0002.1_at_AC_acceptor/Jaspar(0.652)
More Information | Similar Motifs Found
motif file (matrix)
46 * C G T A A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C G T A C G T 1e-3-7.767e+005.26%0.00%0.0bp (0.0bp)Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer(0.623)
More Information | Similar Motifs Found
motif file (matrix)
47 * A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A 1e-3-7.767e+005.26%0.00%0.0bp (0.0bp)HOXC13/MA0907.1/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
48 * A C T G A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A 1e-3-7.767e+005.26%0.00%0.0bp (0.0bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.557)
More Information | Similar Motifs Found
motif file (matrix)
49 * A G T C A C T G C G T A C G T A A C G T A C T G A C T G A C T G A C T G C G T A A C T G C G T A A C T G A C T G C G T A A G T C 1e-3-7.767e+005.26%0.00%0.0bp (0.0bp)MZF1/MA0056.1/Jaspar(0.578)
More Information | Similar Motifs Found
motif file (matrix)
50 * A C G T A C G T C G T A A C G T A C T G A G T C A G T C C G T A C G T A A C T G 1e-3-7.074e+005.26%0.01%0.0bp (10.2bp)NFIA/MA0670.1/Jaspar(0.775)
More Information | Similar Motifs Found
motif file (matrix)
51 * C G T A C G T A C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A 1e-3-7.074e+005.26%0.00%0.0bp (6.6bp)Nr2e1/MA0676.1/Jaspar(0.734)
More Information | Similar Motifs Found
motif file (matrix)
52 * A C G T C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T 1e-3-7.074e+005.26%0.01%0.0bp (11.9bp)Mecom/MA0029.1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
53 * A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G 1e-3-7.074e+005.26%0.01%0.0bp (28.5bp)E2F(E2F)/Hela-CellCycle-Expression/Homer(0.631)
More Information | Similar Motifs Found
motif file (matrix)
54 * A C G T A C T G A C T G A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A G T C C G T A 1e-3-7.074e+005.26%0.00%0.0bp (0.0bp)SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar(0.724)
More Information | Similar Motifs Found
motif file (matrix)
55 * G A T C A T C G T A C G C G T A A C T G A C T G C T A G C G T A A T C G C T G A C T A G A C T G A T C G C T G A G T C A A C T G 1e-2-6.381e+005.26%0.01%0.0bp (18.9bp)KLF5/MA0599.1/Jaspar(0.646)
More Information | Similar Motifs Found
motif file (matrix)