Information for 8-TGCAGBCAVTHTA (Motif 18)

A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A
Reverse Opposite:
A C G T C G T A C T G A C G T A A G C T A C G T A T C G T G A C A T G C C G A T A T C G G T A C C G T A
p-value:1e-6
log p-value:-1.599e+01
Information Content per bp:1.684
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets54.7 +/- 17.6bp
Average Position of motif in Background47.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGCAGBCAVTHTA
---MRSCACTYAA
 A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGCAGBCAVTHTA
-NCTGTCAATCAN
 A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGCAGBCAVTHTA
-SCTGTCAVTCAV
 A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGCAGBCAVTHTA
-----GCACTTAA
 A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A
A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGBCAVTHTA
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TGCAGBCAVTHTA-
----NSCACTYVAV
 A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TGCAGBCAVTHTA----
-TAAGCCACTTAACATT
 A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A A C G T A C G T A C G T A C G T
A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGBCAVTHTA
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TGCAGBCAVTHTA----
-TAAGCCACTTGAAATT
 A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TGCAGBCAVTHTA
CTTCTGGGAAA---
 A C G T A C G T A C T G T A G C G C T A A T C G A C T G T A G C C G T A T C G A C G A T G A C T C G A T C G T A
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T