Information for 9-TTCGTCCCTG (Motif 40)

A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G A C T G C G T A A G T C A C T G C G T A C G T A
p-value:1e-3
log p-value:-7.767e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background72.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTCGTCCCTG
ACTTTCGTTTCT-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:2
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TTCGTCCCTG--
GATAATTAATCCCTCTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

PH0124.1_Obox5_1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGTCCCTG--
NANANTTAATCCCNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTCGTCCCTG
CNGTCCTCCC--
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGTCCCTG--
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TTCGTCCCTG---
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TTCGTCCCTG
YCTTTGTTCC--
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTCGTCCCTG
TACGTCAT--
 A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TTCGTCCCTG--
------GCTGTG
 A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTCGTCCCTG
BNTGDCCTTG
 A C G T A C G T A G T C A C T G A C G T A G T C A G T C A G T C A C G T A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G