Information for 11-CTATAAATTAHTG (Motif 21)

A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G
Reverse Opposite:
A G T C C G T A C A G T C G A T C G T A C G T A A C G T A G C T A G C T C G T A A C G T C G T A A C T G
p-value:1e-6
log p-value:-1.506e+01
Information Content per bp:1.802
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif30.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets44.7 +/- 19.2bp
Average Position of motif in Background60.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0106.1_Msx1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTATAAATTAHTG-
TGCAACTAATTAATTC
 A C G T A C G T A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G A C G T
A C G T T C A G G T A C G C T A C T G A G A T C G A C T G T C A C G T A C G A T C G A T C T G A C T G A A C G T G C A T G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTATAAATTAHTG
TCTAAAAATAGA--
 A C G T A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTATAAATTAHTG
ACTATAAATAGA--
 A C G T A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T

PH0062.1_Hoxb7/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTATAAATTAHTG---
GTAGTAATTAATGCAA
 A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G A C G T A C G T A C G T
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTATAAATTAHTG
GGCCATAAATCAC--
 A C G T A C G T A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTATAAATTAHTG
GCTATAAATAGC--
 A C G T A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T

Hoxd8/MA0910.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTATAAATTAHTG-
NAGCCATTAATTANTTA
 A C G T A C G T A C G T A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTATAAATTAHTG-
NAGCCATTAATTANTTA
 A C G T A C G T A C G T A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

HOXA5/MA0158.1/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CTATAAATTAHTG
-----AATTAGTG
 A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G
A C G T A C G T A C G T A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G

PH0055.1_Hoxa7_2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTATAAATTAHTG-
TNCCATTAATTACTNC
 A C G T A C G T A G T C A C G T C G T A C G A T C T G A C T G A C G T A A C G T A C G T C G T A G A C T C G A T C T A G A C G T
A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C