Information for 23-CTGACTCTTAAAA (Motif 47)

A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A G T C C G T A A C T G
p-value:1e-3
log p-value:-7.767e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTGACTCTTAAAA-
---GCTCGTAAAAA
 A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGACTCTTAAAA---
AAACCTCGTAAAATTT
 A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGACTCTTAAAA---
AAAGCTCGTAAAATTT
 A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXD12/MA0873.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTGACTCTTAAAA-
---AGTCGTAAAAA
 A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTGACTCTTAAAA
---CCYMATAAAA
 A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CTGACTCTTAAAA-
----GTCGTAAAAT
 A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

HOXC12/MA0906.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGACTCTTAAAA-
---GGTCGTAAAAA
 A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGACTCTTAAAA
---NCYAATAAAA
 A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGACTCTTAAAA--
---GGTCGTAAAATT
 A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTGACTCTTAAAA-
----GTCGTAAAAA
 A G T C A C G T A C T G C G T A A G T C A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A