Information for 5-TTTGCCTDHTADGTGA (Motif 8)

A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A
Reverse Opposite:
C G A T A T G C C T G A G T A C G C A T C A G T C T G A C G T A G C T A G T C A T A C G A T C G A G T C T G C A C T G A G T C A
p-value:1e-8
log p-value:-2.004e+01
Information Content per bp:1.629
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif21.05%
Number of Background Sequences with motif38.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets50.8 +/- 28.1bp
Average Position of motif in Background46.4 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCCTDHTADGTGA
NNACTTGCCTT--------
 A C G T A C G T A C G T A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCCTDHTADGTGA
ATTTGCATAT-------
 A C G T A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TTTGCCTDHTADGTGA
TTCATTTGCATAT-------
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCTDHTADGTGA
ATTTGCATAA-------
 A C G T A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TTTGCCTDHTADGTGA
-TTGACTTTT------
 A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TTTGCCTDHTADGTGA
NTTGGCANN-------
 A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:TTTGCCTDHTADGTGA
-TTGCGTGCVA-----
 A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.47
Offset:1
Orientation:forward strand
Alignment:TTTGCCTDHTADGTGA
-TTGGCA---------
 A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:TTTGCCTDHTADGTGA
GTGGCGTGACNG----
 A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.47
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCCTDHTADGTGA
TNTAATTTGCATACNA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G T A G C A T G C A C G T C G A T G A C T A G C T G T C A C G T A A C T G A G C T A T C G C G T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T