Information for 4-CCCYATKGAWWRT (Motif 7)

A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T
Reverse Opposite:
C G T A A G T C G C A T C G T A A C G T A G T C G T A C G T C A A C G T C T A G A C T G A C T G A C T G
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.842
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.0 +/- 18.5bp
Average Position of motif in Background51.2 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCYATKGAWWRT
ATTCCCAAGGGAAT--
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCYATKGAWWRT
NGTCCCNNGGGA----
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCYATKGAWWRT-
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

CUX1/MA0754.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCYATKGAWWRT
--NTATCGATTA-
 A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T
A C G T A C G T C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CCCYATKGAWWRT
NTCNTCCCCTATNNGNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCYATKGAWWRT
--CCATTGTTC--
 A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T
A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCCYATKGAWWRT-
----ATTGATTYND
 A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCCYATKGAWWRT
---AATGGAAAAT
 A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T
A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCCYATKGAWWRT
---NATGGAAAAN
 A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T
A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

CUX2/MA0755.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCCYATKGAWWRT
--TTATCGATTA-
 A G T C A G T C A G T C A G T C C G T A A C G T A C T G A C T G C G T A C G A T C G A T C T A G A C G T
A C G T A C G T C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T