Information for 20-ACTCAAGGCAATT (Motif 45)

C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C G T
p-value:1e-3
log p-value:-7.767e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ACTCAAGGCAATT--
----AAGGCAAGTGT
 C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ACTCAAGGCAATT
-NTCAAGGTCA--
 C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACTCAAGGCAATT
-BTCAAGGTCA--
 C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ACTCAAGGCAATT-------
----AAAGTAATTAGTGAAT
 C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACTCAAGGCAATT
--TCAAGGTCATA
 C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACTCAAGGCAATT
-TTCAAGGTCAT-
 C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACTCAAGGCAATT
AGCCACTCAAG------
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACTCAAGGCAATT-------
----CAGGTAATTACCTCAG
 C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTCAAGGCAATT
AAGTTCAAGGTCAGC
 A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACTCAAGGCAATT
---CAAGGHCANV
 C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G