Information for 15-RMSCWSRKSMSKYTKC (Motif 26)

C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C
Reverse Opposite:
A C T G T G A C C G T A T C A G G T A C A T G C A C T G A T G C G T A C A G T C A T G C C G T A A C T G A T G C A C G T A G T C
p-value:1e-5
log p-value:-1.314e+01
Information Content per bp:1.694
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif57.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets41.0 +/- 27.0bp
Average Position of motif in Background54.7 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.52
Offset:11
Orientation:forward strand
Alignment:RMSCWSRKSMSKYTKC-
-----------GCTTCC
 C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--RMSCWSRKSMSKYTKC
ATGCCCTGAGGC------
 A C G T A C G T C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:3
Score:0.45
Offset:1
Orientation:forward strand
Alignment:RMSCWSRKSMSKYTKC
-ATCACGTGAC-----
 C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C
A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.45
Offset:-2
Orientation:reverse strand
Alignment:--RMSCWSRKSMSKYTKC
NTGCCCANNGGTNA----
 A C G T A C G T C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.45
Offset:-2
Orientation:reverse strand
Alignment:--RMSCWSRKSMSKYTKC
WTGSCCTSAGGS------
 A C G T A C G T C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:6
Score:0.45
Offset:1
Orientation:forward strand
Alignment:RMSCWSRKSMSKYTKC
-ATCACGTGAC-----
 C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C
A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.44
Offset:1
Orientation:reverse strand
Alignment:RMSCWSRKSMSKYTKC
-ACCACGTGAC-----
 C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C
A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.44
Offset:3
Orientation:reverse strand
Alignment:RMSCWSRKSMSKYTKC
---CAGGTGAGG----
 C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:9
Score:0.44
Offset:1
Orientation:forward strand
Alignment:RMSCWSRKSMSKYTKC
-ATCACGTGAC-----
 C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C
A C G T T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.44
Offset:-2
Orientation:forward strand
Alignment:--RMSCWSRKSMSKYTKC
GAGCCCTTGTCCCTAA--
 A C G T A C G T C T A G T G C A A T C G A G T C C G A T A T C G C T A G A C T G A T C G G T A C A T C G A C T G A G T C C G A T A C T G A G T C
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T A C G T