Information for 1-AAGVCHTGAAAATACT (Motif 1)

C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T
Reverse Opposite:
C T G A A T C G A C G T C G T A C G A T A G C T A C G T A C G T A G T C C G T A C A G T A C T G A C G T G T A C C G A T A C G T
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.761
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif21.05%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.8 +/- 21.5bp
Average Position of motif in Background52.4 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAGVCHTGAAAATACT
-----CCAAAAATAG-
 C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T
A C G T A C G T A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAGVCHTGAAAATACT
----DCYAAAAATAGM
 C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T
A C G T A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAGVCHTGAAAATACT-
--ATGCTAAAAATAGAA
 C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T A C G T
A C G T A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AAGVCHTGAAAATACT
----GCTAAAAATAGC
 C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T
A C G T A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AAGVCHTGAAAATACT
----ACTGAAACCA--
 C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T
A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAGVCHTGAAAATACT
-AGAAACGAAAGT---
 C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAGVCHTGAAAATACT
--TACTGGAAAAAAAA
 C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T
A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AAGVCHTGAAAATACT
----KCCAAAAATAGC
 C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T
A C G T A C G T A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

PH0064.1_Hoxb9/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAGVCHTGAAAATACT
AGAGCCATAAAATTCG-
 A C G T C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAGVCHTGAAAATACT
ACGGCCATAAAATTAAT
 A C G T C G T A C G T A A C T G T C G A G T A C G C T A C G A T A C T G C G T A C G T A C T G A C G T A A C G T C G T A T A G C A G C T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T